RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 HLA-DRB1P01911 266 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 RPLP1P05386 114 aaKnown RBP18.39■□□□□ 0.53
SMPD1-209ENST00000533196 MAP2K4P45985 399 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 OR3A3P47888 321 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 NPBQ8NG41 125 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 OR56B1Q8NGI3 324 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 OR8U1Q8NH10 309 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 EDARADDQ8WWZ3 215 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 FAM3DQ96BQ1 224 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 ZMAT5Q9UDW3 170 aaKnown RBP18.39■□□□□ 0.53
SMPD1-209ENST00000533196 TMEM50BP56557 158 aa18.38■□□□□ 0.53
SMPD1-209ENST00000533196 HLA-DRB3P79483 266 aa18.38■□□□□ 0.53
SMPD1-209ENST00000533196 KIR2DS1Q14954 304 aa18.38■□□□□ 0.53
SMPD1-209ENST00000533196 C12orf4Q9NQ89 552 aa18.38■□□□□ 0.53
SMPD1-209ENST00000533196 RAB26Q9ULW5 256 aa18.38■□□□□ 0.53
SMPD1-209ENST00000533196 OR5H14A6NHG9 310 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 CCL24O00175 119 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 PDCD5O14737 125 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 ST8SIA5O15466 376 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 NDUFA3O95167 84 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 SLC2A2P11168 524 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-209ENST00000533196 ZBTB25P24278 435 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 MC5RP33032 325 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 VEGFCP49767 419 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 C5orf64Q2M2E5 130 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 C2orf76Q3KRA6 126 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 CNBD2Q96M20 576 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 KCTD7Q96MP8 289 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 OR51J1Q9H342 316 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 Q9N2K0 584 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 KIAA1456Q9P272 454 aa18.37■□□□□ 0.53
SMPD1-209ENST00000533196 TRAV1-2A0A0B4J238 106 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 LDLRAD4O15165 306 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 MRPS14O60783 128 aaKnown RBP18.36■□□□□ 0.53
SMPD1-209ENST00000533196 PSMB8P28062 276 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 RAX2Q96IS3 184 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 ARHGAP5-AS1Q96IT6 56 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 CMSS1Q9BQ75 279 aaKnown RBP18.36■□□□□ 0.53
SMPD1-209ENST00000533196 AGMATQ9BSE5 352 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 PECRQ9BY49 303 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 RAB22AQ9UL26 194 aa18.36■□□□□ 0.53
SMPD1-209ENST00000533196 HSPA12AO43301 675 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 DENRO43583 198 aaKnown RBP18.35■□□□□ 0.53
SMPD1-209ENST00000533196 RBBP9O75884 186 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 CEACAM6P40199 344 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 CLDN12P56749 244 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 LIN54Q6MZP7 749 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 PTX4Q96A99 478 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 RITA1Q96K30 269 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 RNF5Q99942 180 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 HDHD3Q9BSH5 251 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-209ENST00000533196 NDUFB11Q9NX14 153 aa18.35■□□□□ 0.53
SMPD1-209ENST00000533196 K7EIL1 84 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 CT45A6P0DMU7 189 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 CT45A5P0DMU8 189 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 CT45A7P0DMV0 189 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 PPIFP30405 207 aaKnown RBP18.34■□□□□ 0.53
SMPD1-209ENST00000533196 KRTAP10-11P60412 298 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 GABARAPL2P60520 117 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 SSX1Q16384 188 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 CD200R1LQ6Q8B3 271 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 FAM131AQ6UXB0 335 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 MYOZ3Q8TDC0 251 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 C4orf3Q8WVX3 66 aa18.34■□□□□ 0.53
SMPD1-209ENST00000533196 RBMXL1Q96E39 390 aaKnown RBP18.34■□□□□ 0.53
SMPD1-209ENST00000533196 C11orf54Q9H0W9 315 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-209ENST00000533196 IGHV7-81A0A0B4J1V7 117 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 TMEM272A0A1B0GTI8 110 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 GALP22466 123 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 CNTFRP26992 372 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 RPL39P5Q59GN2 51 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 LCNL1Q6ZST4 164 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 OR5AN1Q8NGI8 311 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 WASHC3Q9Y3C0 194 aa18.33■□□□□ 0.52
SMPD1-209ENST00000533196 TRDV1A0A1B0GX56 115 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 H0YJW9 148 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 ATP6V0E1O15342 81 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 SCTP09683 121 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 MYL9P24844 172 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 HOXD3P31249 432 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-209ENST00000533196 SERPINB10P48595 397 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 MRPS15P82914 257 aaKnown RBP18.32■□□□□ 0.52
SMPD1-209ENST00000533196 DCTN2Q13561 401 aaKnown RBP18.32■□□□□ 0.52
SMPD1-209ENST00000533196 PLAC9Q5JTB6 97 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 HES5Q5TA89 166 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 ZNF660Q6AZW8 331 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-209ENST00000533196 TMEM65Q6PI78 240 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 OR5M8Q8NGP6 311 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 ABHD14BQ96IU4 210 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 UBE2E2Q96LR5 201 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 TOLLIPQ9H0E2 274 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 OR1A1Q9P1Q5 309 aa18.32■□□□□ 0.52
SMPD1-209ENST00000533196 TRAV41A0A0B4J266 112 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 TRDCB7Z8K6 153 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 IGLV1-40P01703 118 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 FHL3Q13643 280 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 OR4A4PQ8NGN8 299 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 DUX3Q96PT4 197 aa18.31■□□□□ 0.52
SMPD1-209ENST00000533196 PARP12Q9H0J9 701 aaKnown RBP18.31■□□□□ 0.52
SMPD1-209ENST00000533196 PARP11Q9NR21 331 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms