RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PARVAQ9NVD7 372 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 UBAP1Q9NZ09 502 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 MRPS16Q9Y3D3 137 aaKnown RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 ARHGAP32A7KAX9 2087 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 SHANK3Q9BYB0 1731 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 HMGXB3Q12766 1538 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 GRIN2AQ12879 1464 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 MAGI1Q96QZ7 1491 aaPredicted RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 CRB1P82279 1406 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 NPATQ14207 1427 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 IGKV1D-17A0A075B6S4 117 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 A0A1W2PNN7 141 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 STX10O60499 249 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 IGKV1-17P01599 117 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 HLA-DRAP01903 254 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 HBZP02008 142 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 TYMSP04818 313 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 OR13C7P0DN81 318 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 CRABP2P29373 138 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 GABRA3P34903 492 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 OR1E2P47887 323 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 ACTBP60709 375 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 ACTG1P63261 375 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 HPCAP84074 193 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 TMEM267Q0VDI3 215 aaPredicted RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 BAMBIQ13145 260 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 BIKQ13323 160 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 APOFQ13790 326 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 ZNF141Q15928 474 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 PTRHD1Q6GMV3 140 aaKnown RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 SCGB1D4Q6XE38 83 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 SCXQ7RTU7 201 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 HS3ST5Q8IZT8 346 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 Q8N402 240 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 EIF4E3Q8N5X7 224 aaKnown RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 HAVCR2Q8TDQ0 301 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 OR7D2Q96RA2 312 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 EBNA1BP2Q99848 306 aaKnown RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 DUSP21Q9H596 190 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 USE1Q9NZ43 259 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 SNX10Q9Y5X0 201 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 TRPM3Q9HCF6 1732 aaPredicted RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 RIMS1Q86UR5 1692 aaKnown RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 EIF4G3O43432 1585 aaKnown RBP1.51□□□□□ -2.17
CD44-234ENST00000531873 GLI2P10070 1586 aa1.51□□□□□ -2.17
CD44-234ENST00000531873 EPRSP07814 1512 aaKnown RBP1.5□□□□□ -2.17
CD44-234ENST00000531873 KDM5BQ9UGL1 1544 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 SCAF11Q99590 1463 aaKnown RBP1.5□□□□□ -2.17
CD44-234ENST00000531873 PTPRGP23470 1445 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 FGD6Q6ZV73 1430 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 STRCQ7RTU9 1775 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 ZBED9Q6R2W3 1325 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 MYO3BQ8WXR4 1341 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 D6RAR5 112 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 K7EQS6 105 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 M0QZ92 97 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CXCR6O00574 342 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 PFDN6O15212 129 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 SLC16A4O15374 487 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 EEF1E1O43324 174 aaKnown RBP1.5□□□□□ -2.17
CD44-234ENST00000531873 DENRO43583 198 aaKnown RBP1.5□□□□□ -2.17
CD44-234ENST00000531873 E2F6O75461 281 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 IGLV3-27P01718 113 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OPN1SWP03999 348 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 FBP1P09467 338 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OCM2P0CE71 109 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OR12D1P0DN82 309 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CDK2P24941 298 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 DAPP51397 102 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 TSPAN31Q12999 210 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 PPP1R1AQ13522 171 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 IHHQ14623 411 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 MAPK14Q16539 360 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 DEFB134Q4QY38 66 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CCDC122Q5T0U0 273 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CST9Q5W186 159 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OR2V1Q8NHB1 315 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 MUC7Q8TAX7 377 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CD200R1Q8TD46 325 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CYGBQ8WWM9 190 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 HIST1H2BAQ96A08 127 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 TLCD1Q96CP7 247 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 SLC25A44Q96H78 314 aaPredicted RBP1.5□□□□□ -2.17
CD44-234ENST00000531873 ABHD14BQ96IU4 210 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 IGF2BP2-AS1Q96M15 143 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OR52B2Q96RD2 323 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 DHRS9Q9BPW9 319 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 TIPINQ9BVW5 301 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 SPZ1Q9BXG8 430 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 MED28Q9H204 178 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 OR51B6Q9H340 312 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 MAP1LC3AQ9H492 121 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 ASF1BQ9NVP2 202 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 CAMSAP1Q5T5Y3 1602 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 PDE4DIPQ5VU43 2346 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 GRIN2BQ13224 1484 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 LTBP2Q14767 1821 aa1.5□□□□□ -2.17
CD44-234ENST00000531873 PIEZO1Q92508 2521 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 SSH2Q76I76 1423 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms