RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 OR2T5Q6IEZ7 315 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 ZNF833PQ6ZTB9 187 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 ODF3L1Q8IXM7 274 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 DEFB107AQ8IZN7 70 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 TMEM61Q8N0U2 210 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 CCDC197Q8NCU1 140 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 OR52B4Q8NGK2 314 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 OR2T29Q8NH02 315 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 GRPEL2Q8TAA5 225 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 CCDC107Q8WV48 283 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 FGGYQ96C11 551 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 NSL1Q96IY1 281 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 CLCC1Q96S66 551 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 FEVQ99581 238 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 TBX5Q99593 518 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 C11orf68Q9H3H3 251 aaKnown RBP6.08□□□□□ -1.44
CD44-232ENST00000531118 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 SAA2-SAA4A0A096LPE2 208 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 SPINT2O43291 252 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 SAA2P0DJI9 122 aaPredicted RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 CALB2P22676 271 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 ALKBH1Q13686 389 aaKnown RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 TRIM25Q14258 630 aaKnown RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 ZNF691Q5VV52 312 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 TMEM236Q5W0B7 351 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 LPCAT4Q643R3 524 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 KCTD20Q7Z5Y7 419 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 PRR18Q8N4B5 295 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 OR10K1Q8NGX5 313 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 OR1L1Q8NH94 360 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 C11orf45Q8TAV5 145 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 TINAGL1Q9GZM7 467 aaPredicted RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 PARP12Q9H0J9 701 aaKnown RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 ARL8BQ9NVJ2 186 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 TECRQ9NZ01 308 aaKnown RBP6.07□□□□□ -1.44
CD44-232ENST00000531118 SELENOKQ9Y6D0 94 aa6.07□□□□□ -1.44
CD44-232ENST00000531118 METTL15A6NJ78 407 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 IGLL5B9A064 214 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 M0R129 80 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 UBE2CO00762 179 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 RBMXL2O75526 392 aaKnown RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 OR7C1O76099 320 aaPredicted RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 HBZP02008 142 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 OSMP13725 252 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 FOLR2P14207 255 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 OR3A3P47888 321 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 EXOSC2Q13868 293 aaKnown RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 KISS1Q15726 138 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 C6orf183Q5T699 404 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 TMEM244Q5VVB8 128 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 ZNF562Q6V9R5 426 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 ZNF497Q6ZNH5 498 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 BCDIN3DQ7Z5W3 292 aaKnown RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 PXT1Q8NFP0 134 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 OR5T1Q8NG75 326 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 NEK7Q8TDX7 302 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 GIPC3Q8TF64 312 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 CACNG8Q8WXS5 425 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 SNAPC3Q92966 411 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 IFT22Q9H7X7 185 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 RAB9BQ9NP90 201 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 TVP23BQ9NYZ1 205 aa6.06□□□□□ -1.44
CD44-232ENST00000531118 RCC2Q9P258 522 aaKnown RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 METTL1Q9UBP6 276 aaKnown RBP6.06□□□□□ -1.44
CD44-232ENST00000531118 KIR2DL5BA0A0G2JN68 375 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 KIR2DL5BA0A0G2JPC4 375 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 OR5H14A6NHG9 310 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 C16orf90A8MZG2 172 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 GABRPO00591 440 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 SLC22A1O15245 554 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 SULT1B1O43704 296 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 PRKYO43930 277 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 RBBP9O75884 186 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 SPDEFO95238 335 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 HOXB6P17509 224 aaKnown RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 FCGR2BP31994 310 aaPredicted RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 PPP1CCP36873 323 aaKnown RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 RBM11P57052 281 aaKnown RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 ADARB1P78563 741 aaKnown RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 SSBP2P81877 361 aaPredicted RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 GK3PQ14409 553 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 FXYD3Q14802 87 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 NHLRC3Q5JS37 347 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 FAM71F2Q6NXP2 309 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 GLDNQ6ZMI3 551 aaPredicted RBP6.05□□□□□ -1.44
CD44-232ENST00000531118 FAM220AQ7Z4H9 259 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 DHFR2Q86XF0 187 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 KIR2DL5AQ8N109 375 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 ZNF645Q8N7E2 425 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 OR51A4Q8NGJ6 313 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 OR13C3Q8NGS6 347 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 TNFAIP8L1Q8WVP5 186 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 GHSRQ92847 366 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 MRPS24Q96EL2 167 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms