RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 HMGN4O00479 90 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 HPRT1P00492 218 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 RCC1P18754 421 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-229ENST00000531014 ZNF750Q32MQ0 723 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 ZC3H3Q8IXZ2 948 aaKnown RBP6.34□□□□□ -1.4
CTNND1-229ENST00000531014 SLC25A40Q8TBP6 338 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 METTL26Q96S19 204 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 LRP12Q9Y561 859 aa6.34□□□□□ -1.4
CTNND1-229ENST00000531014 IGHV3-43A0A0B4J1X8 118 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 A0A1B0GX78 115 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 HOXD4P09016 255 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 IGHV3-43DP0DP04 118 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 GPR183P32249 361 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 LIM2P55344 173 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 ZNF117Q03924 483 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 ISXQ2M1V0 245 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 OR10J3Q5JRS4 329 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 OR4X2Q8NGF9 303 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 LMO3Q8TAP4 145 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 SARGQ9BW04 601 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 CA10Q9NS85 328 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 IGKV3D-11A0A0A0MRZ8 115 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TRAV38-1A0A0B4J264 116 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 CTDSPLO15194 276 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 IGKV3-15P01624 115 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 FZD5Q13467 585 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 NOXO1Q8NFA2 376 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 NT5CQ8TCD5 201 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 SLC25A2Q9BXI2 301 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 GPR35Q9HC97 309 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 GLRX2Q9NS18 164 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 HDGFL3Q9Y3E1 203 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 ASPDHA6ND91 283 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 KLF4O43474 513 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 OR2A4O95047 310 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 RPS4XP62701 263 aaKnown RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 C1orf185Q5T7R7 199 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 BCL2L10Q9HD36 194 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 STARD10Q9Y365 291 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 ECM29Q5VYK3 1845 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 A0A0U1RQS6 177 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 PSMB11A5LHX3 300 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 VWC2LB2RUY7 222 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 F2RL2O00254 374 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TSPAN2O60636 221 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TSPAN7P41732 249 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TNFAIP6P98066 277 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-229ENST00000531014 PDCD1Q15116 288 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 SLC25A42Q86VD7 318 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TSPAN32Q96QS1 320 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 SOSTQ9BQB4 213 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TMUB1Q9BVT8 246 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 DEFB127Q9H1M4 99 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 MIXL1Q9H2W2 232 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 TUBD1Q9UJT1 453 aa6.33□□□□□ -1.4
CTNND1-229ENST00000531014 PGPEP1LA6NFU8 196 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 S1PR2O95136 353 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 PPICP45877 212 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 MVDP53602 400 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 SPATA46Q5T0L3 261 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 OR52E5Q8NH55 327 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 HMGCLL1Q8TB92 370 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 CRYGNQ8WXF5 182 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 PRDM13Q9H4Q3 707 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 YAE1D1Q9NRH1 226 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
CTNND1-229ENST00000531014 ZNF107Q9UII5 783 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-229ENST00000531014 HILPDAQ9Y5L2 63 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 TRDCB7Z8K6 153 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 HOXA3O43365 443 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-229ENST00000531014 SNAI2O43623 268 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 PLPP2O43688 288 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 TMEM179BQ7Z7N9 219 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 ZBTB34Q8NCN2 500 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 MRPL24Q96A35 216 aaKnown RBP6.32□□□□□ -1.4
CTNND1-229ENST00000531014 FOXB1Q99853 325 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 SIRT5Q9NXA8 310 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 TRBV20OR9-2A0A075B6H5 130 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 GRIFINA4D1Z8 144 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 NPFFO15130 113 aa6.32□□□□□ -1.4
CTNND1-229ENST00000531014 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms