RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MRGPRX4Q96LA9 322 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 P2RX4Q99571 388 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 FNDC4Q9H6D8 234 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 NEU3Q9UQ49 428 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 HMGN4O00479 90 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 HPRT1P00492 218 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 RCC1P18754 421 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF750Q32MQ0 723 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 LMO3Q8TAP4 145 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 SLC25A40Q8TBP6 338 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 METTL26Q96S19 204 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 LRP12Q9Y561 859 aa6.34□□□□□ -1.4
CTNND1-216ENST00000527467 IGHV3-43A0A0B4J1X8 118 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1B0GX78 115 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 HOXD4P09016 255 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 IGHV3-43DP0DP04 118 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 GPR183P32249 361 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 LIM2P55344 173 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF117Q03924 483 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 ISXQ2M1V0 245 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 OR10J3Q5JRS4 329 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 OR4X2Q8NGF9 303 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 SARGQ9BW04 601 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 CA10Q9NS85 328 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 IGKV3D-11A0A0A0MRZ8 115 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TRAV38-1A0A0B4J264 116 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 CTDSPLO15194 276 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 IGKV3-15P01624 115 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 FZD5Q13467 585 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 NOXO1Q8NFA2 376 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 NT5CQ8TCD5 201 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 SLC25A2Q9BXI2 301 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 GPR35Q9HC97 309 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 GLRX2Q9NS18 164 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 HDGFL3Q9Y3E1 203 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 ASPDHA6ND91 283 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 KLF4O43474 513 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 OR2A4O95047 310 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 RPS4XP62701 263 aaKnown RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 C1orf185Q5T7R7 199 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 BCL2L10Q9HD36 194 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 STARD10Q9Y365 291 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 ECM29Q5VYK3 1845 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 A0A0U1RQS6 177 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 PSMB11A5LHX3 300 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 VWC2LB2RUY7 222 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 F2RL2O00254 374 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TSPAN2O60636 221 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TSPAN7P41732 249 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TNFAIP6P98066 277 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-216ENST00000527467 PDCD1Q15116 288 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 SLC25A42Q86VD7 318 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TSPAN32Q96QS1 320 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 SOSTQ9BQB4 213 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TMUB1Q9BVT8 246 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 DEFB127Q9H1M4 99 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 MIXL1Q9H2W2 232 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 TUBD1Q9UJT1 453 aa6.33□□□□□ -1.4
CTNND1-216ENST00000527467 PGPEP1LA6NFU8 196 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 S1PR2O95136 353 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 PPICP45877 212 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 MVDP53602 400 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 SPATA46Q5T0L3 261 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 OR52E5Q8NH55 327 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 HMGCLL1Q8TB92 370 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CRYGNQ8WXF5 182 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 PRDM13Q9H4Q3 707 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 YAE1D1Q9NRH1 226 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF107Q9UII5 783 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 HILPDAQ9Y5L2 63 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 TRDCB7Z8K6 153 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 HOXA3O43365 443 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 SNAI2O43623 268 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 PLPP2O43688 288 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM179BQ7Z7N9 219 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ZBTB34Q8NCN2 500 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 MRPL24Q96A35 216 aaKnown RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 FOXB1Q99853 325 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 SIRT5Q9NXA8 310 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 MYH15Q9Y2K3 1946 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 1144.5 ms