RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SMIM14Q96QK8 99 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 TNFRSF13CQ96RJ3 184 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 GPX7Q96SL4 187 aaPredicted RBP4.96□□□□□ -1.62
CD44-225ENST00000527326 GNB1LQ9BYB4 327 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 WDR61Q9GZS3 305 aaKnown RBP4.96□□□□□ -1.62
CD44-225ENST00000527326 MS4A6AQ9H2W1 248 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 NAA60Q9H7X0 242 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 WDR54Q9H977 334 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 IL36GQ9NZH8 169 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 HS3ST2Q9Y278 367 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 INSL5Q9Y5Q6 135 aa4.96□□□□□ -1.62
CD44-225ENST00000527326 NUP210Q8TEM1 1887 aaPredicted RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 CENPVL1A0A0U1RR11 272 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 hCG_38984A0A1B0GV85 526 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 SPAARA0A1B0GVQ0 90 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 A0A1W2PS18 150 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 hADV38S2A0JD32 116 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 FAM24AA6NFZ4 105 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 MANSC4A6NHS7 340 aaPredicted RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 SLC22A20A6NK97 555 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 M0QZQ0 153 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 PLPP1O14494 284 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 DEGS1O15121 323 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 ERI3O43414 337 aaKnown RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 TIMP1P01033 207 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 CEBPBP17676 345 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 PGCP20142 388 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 PMCHP20382 165 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 CRYBB3P26998 211 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 UBE2G1P62253 170 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 MRPS34P82930 218 aaKnown RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 QRFPP83859 136 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 ARF1P84077 181 aaKnown RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 TMEM187Q14656 261 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 IGFBP7Q16270 282 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 CEACAM21Q3KPI0 293 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 FAM162BQ5T6X4 162 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 C1orf140Q5VVS0 124 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 RFLNAQ6ZTI6 216 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 SLC22A24Q8N4F4 322 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 TTC9CQ8N5M4 171 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 OR8B3Q8NGG8 313 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 OR5C1Q8NGR4 320 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 SCGB1C1Q8TD33 95 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 MBD6Q96DN6 1003 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 OR8B2Q96RD0 313 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 NMNAT3Q96T66 252 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 LMF2Q9BU23 707 aaKnown RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 VN1R1Q9GZP7 353 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 MS4A5Q9H3V2 200 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 DECR2Q9NUI1 292 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 WSB2Q9NYS7 404 aaPredicted RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 TAAR3PQ9P1P4 343 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 RARRES3Q9UL19 164 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 UFC1Q9Y3C8 167 aa4.95□□□□□ -1.62
CD44-225ENST00000527326 PTRH2Q9Y3E5 179 aaKnown RBP4.95□□□□□ -1.62
CD44-225ENST00000527326 COL6A3P12111 3177 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TICRRQ7Z2Z1 1910 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 A0A087WV48 116 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TRAV25A0A0B4J276 109 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 A0A0B4J2E0 115 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TEX48A0A1B0GUV7 120 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 A0A1B0GX12 115 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 A4D1N5 150 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 LIPT2A6NK58 231 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TMEM14DPA8MWL7 114 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ADM5C9JUS6 153 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 FCN1O00602 326 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 PLPP3O14495 311 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 PSPNO60542 156 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 IGLV3-27P01718 113 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 RHOCP08134 193 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 FABP2P12104 132 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ATP1B2P14415 290 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 USF1P22415 310 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 NPY1RP25929 384 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 GPR183P32249 361 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ID1P41134 155 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 NKX2-1P43699 371 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 DYNLT3P51808 116 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ZNF133P52736 654 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 TCL1AP56279 114 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 GRB2P62993 217 aaKnown RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 B4GALNT1Q00973 533 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 POU3F1Q03052 451 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 UNC119Q13432 240 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 FHL1Q13642 323 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 CDKN3Q16667 212 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ZNF658BQ4V348 819 aaPredicted RBP4.94□□□□□ -1.62
CD44-225ENST00000527326 ABCA11PQ4W5N1 156 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TMEM97Q5BJF2 176 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 EMC4Q5J8M3 183 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 GCSAMLQ5JQS6 135 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 TMEM42Q69YG0 159 aa4.94□□□□□ -1.62
CD44-225ENST00000527326 ASPHD2Q6ICH7 369 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms