RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 DHFR2Q86XF0 187 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 PDPNQ86YL7 162 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 CEND1Q8N111 149 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 YIPF7Q8N8F6 280 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 OR8A1Q8NGG7 326 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 OR2T4Q8NH00 348 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 LHFPL5Q8TAF8 219 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 C12orf43Q96C57 262 aaKnown RBP2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 RMND5BQ96G75 393 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 GPER1Q99527 375 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 CDX2Q99626 313 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 RNASE7Q9H1E1 156 aaKnown RBP2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 ABCG5Q9H222 651 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 NANOGQ9H9S0 305 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 PARVBQ9HBI1 364 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 HMG20AQ9NP66 347 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 C8orf17Q9NRJ1 99 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 CA10Q9NS85 328 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 UQCC1Q9NVA1 299 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 RWDD2AQ9UIY3 292 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 OR52A1Q9UKL2 312 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 RFNGQ9Y644 331 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 PXMP4Q9Y6I8 212 aa2.12□□□□□ -2.07
TRAPPC4-207ENST00000526141 CACNA1FO60840 1977 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 IGHV1-45A0A0A0MS14 117 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 FAM236DA0A1B0GTK5 79 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 KNCNA6PVL3 124 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 H0YJW9 148 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 KPNA4O00629 521 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MRASO14807 208 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 RGS5O15539 181 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TRAF3IP2O43734 574 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MFSD11O43934 449 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 POP7O75817 140 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 GPR75O95800 540 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 LTAP01374 205 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ZNF688P0C7X2 276 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 FAM236CP0DP71 79 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 CRABP2P29373 138 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 GABRA3P34903 492 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 NUDT2P50583 147 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 HERVK_113P63121 156 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ATP5G2Q06055 141 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 FABP9Q0Z7S8 132 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 DAZ2Q13117 558 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 IL15RAQ13261 267 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TMEM241Q24JQ0 296 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 PLPPR5Q32ZL2 321 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 RNF212Q495C1 297 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TMEM128Q5BJH2 165 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TMEM78Q5T7P6 136 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MORN3Q6PF18 240 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TOMM20LQ6UXN7 152 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TCF23Q7RTU1 214 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 DAZ4Q86SG3 579 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MARCH3Q86UD3 253 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ORMDL3Q8N138 153 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 C15orf56Q8N910 161 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ZDHHC22Q8N966 263 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 OR52N1Q8NH53 320 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 CT55Q8WUE5 264 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 FRZBQ92765 325 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MS4A6EQ96DS6 147 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TCEAL4Q96EI5 215 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 REEP6Q96HR9 211 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ABHD14BQ96IU4 210 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 CNBD2Q96M20 576 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 OR2A5Q96R48 311 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 TBX5Q99593 518 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 CGREF1Q99674 301 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 VGLL1Q99990 258 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 HDHD3Q9BSH5 251 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 THTPAQ9BU02 230 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 CHCHD7Q9BUK0 85 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 MED28Q9H204 178 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 SH3BGRL3Q9H299 93 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 DAZ1Q9NQZ3 744 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 DAZ3Q9NR90 486 aaKnown RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 LYRM2Q9NU23 88 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 SS18L2Q9UHA2 77 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 ENOPH1Q9UHY7 261 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 PRNDQ9UKY0 176 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 RALGAPA1Q6GYQ0 2036 aa2.11□□□□□ -2.07
TRAPPC4-207ENST00000526141 SYNMO15061 1565 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 LRRK1Q38SD2 2015 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 PLCH2O75038 1416 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 NUP160Q12769 1436 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 TMED7-TICAM2A0A0A6YYA0 188 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 IGKV1-6A0A0C4DH72 117 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 IGHV1-69-2A0A0G2JMI3 117 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 TRAPPC13A5PLN9 417 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 MAP1LC3B2A6NCE7 125 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 C4orf51C9J302 202 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 G3V2T6 193 aa2.1□□□□□ -2.07
TRAPPC4-207ENST00000526141 ARPC5O15511 151 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms