RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ZNF596Q8TC21 504 aa14□□□□□ -0.17
CCS-204ENST00000526066 GINS4Q9BRT9 223 aa14□□□□□ -0.17
CCS-204ENST00000526066 CLEC7AQ9BXN2 247 aa14□□□□□ -0.17
CCS-204ENST00000526066 EHFQ9NZC4 300 aa14□□□□□ -0.17
CCS-204ENST00000526066 NOTCH1P46531 2555 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 VWFP04275 2813 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 J3QRK9 145 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 TUSC2O75896 110 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 PMP2P02689 132 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 PPP1CCP36873 323 aaKnown RBP13.99□□□□□ -0.17
CCS-204ENST00000526066 CEACAM6P40199 344 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 RFX2P48378 723 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 INPP1P49441 399 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 UBE2E1P51965 193 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 BPIFB3P59826 476 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 MEF2DQ14814 521 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 ABHD12Q8N2K0 398 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 ARRDC1Q8N5I2 433 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 LINC00311Q8N616 119 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 ZNF439Q8NDP4 499 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 BEND2Q8NDZ0 799 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 OR10V1Q8NGI7 309 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 OR9G1Q8NH87 305 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 GIMAP1Q8WWP7 306 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 EDARADDQ8WWZ3 215 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 RDH8Q9NYR8 311 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 PSG11Q9UQ72 335 aa13.99□□□□□ -0.17
CCS-204ENST00000526066 MDFIC2A0A1B0GVS7 189 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 UPK1BO75841 260 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 COX7A1P24310 79 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 FAUP35544 74 aaKnown RBP13.98□□□□□ -0.17
CCS-204ENST00000526066 DLX1P56177 255 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 DEFB112Q30KQ8 113 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 UTF1Q5T230 341 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 ZNF626Q68DY1 528 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 ZNF57Q68EA5 555 aaPredicted RBP13.98□□□□□ -0.17
CCS-204ENST00000526066 ZNF660Q6AZW8 331 aaPredicted RBP13.98□□□□□ -0.17
CCS-204ENST00000526066 FAM53AQ6NSI3 398 aaPredicted RBP13.98□□□□□ -0.17
CCS-204ENST00000526066 DHRS11Q6UWP2 260 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 BRD3OSQ6XYD6 125 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 PNKDQ8N490 385 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 LHX4Q969G2 390 aa13.98□□□□□ -0.17
CCS-204ENST00000526066 TINAGL1Q9GZM7 467 aaPredicted RBP13.98□□□□□ -0.17
CCS-204ENST00000526066 CENPVL3A0A0U1RRI6 287 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 CLPSL1A2RUU4 121 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 ODF3BA8MYP8 253 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 J3QR06 171 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 M0QYG6 137 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 TOR1AO14656 332 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 IGLV1-47P01700 117 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 IFNA6P05013 189 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 FCGR2CP31995 323 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 RAB7AP51149 207 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 PRRX1P54821 245 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 KLRD1Q13241 179 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 SLC25A48Q6ZT89 311 aaKnown RBP13.97□□□□□ -0.17
CCS-204ENST00000526066 TMEM17Q86X19 198 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 OR2AK2Q8NG84 335 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 OR4D10Q8NGI6 311 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 OR4C16Q8NGL9 310 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 OR6F1Q8NGZ6 308 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 LEAP2Q969E1 77 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 C7orf50Q9BRJ6 194 aaKnown RBP13.97□□□□□ -0.17
CCS-204ENST00000526066 OR2W1Q9Y3N9 320 aa13.97□□□□□ -0.17
CCS-204ENST00000526066 IGHV1-69DA0A0B4J2H0 117 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 FAM172BPA6NC97 362 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 NDUFA7O95182 113 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 IGHV1-69P01742 117 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 ZNF735P0CB33 412 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 NFYAP23511 347 aaPredicted RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 TSPAN5P62079 268 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 PRB3Q04118 309 aaPredicted RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 SRSF4Q08170 494 aaKnown RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 HLA-DRB5Q30154 266 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 CT45A1Q5HYN5 189 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 TMEM86BQ8N661 226 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 CT45A3Q8NHU0 189 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 BORCS5Q969J3 196 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 CITED1Q99966 193 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 PARP12Q9H0J9 701 aaKnown RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 C11orf54Q9H0W9 315 aaPredicted RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 MMP28Q9H239 520 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 GHITMQ9H3K2 345 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 HRASLSQ9HDD0 168 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 ABCB10Q9NRK6 738 aa13.96□□□□□ -0.17
CCS-204ENST00000526066 SOX21Q9Y651 276 aaPredicted RBP13.96□□□□□ -0.17
CCS-204ENST00000526066 DISC1C4P0D8 188 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 SLC31A2O15432 143 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 PPYP01298 95 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 IGHV3-7P01780 117 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 AMY2AP04746 511 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 AADACP22760 399 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 GNG10P50151 68 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 ZNF134P52741 427 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
CCS-204ENST00000526066 OR4P4Q8NGL7 312 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
CCS-204ENST00000526066 CREB3L1Q96BA8 519 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms