RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 HNRNPA1P09651 372 aaKnown RBP eCLIP4.03□□□□□ -1.76
HIPK3-204ENST00000525975 F2RP25116 425 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 KIR2DS4P43632 304 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 ARL4DP49703 201 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 THBS3P49746 956 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 VEGFBP49765 207 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 ARL16Q0P5N6 197 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 C17orf67Q0P5P2 114 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 FOXL1Q12952 345 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 KIR2DS5Q14953 304 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 KIR2DS1Q14954 304 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 GAB4Q2WGN9 574 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 PLCXD3Q63HM9 321 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 STUMQ69YW2 141 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 RTL10Q7L3V2 364 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 MRPL43Q8N983 215 aaKnown RBP4.03□□□□□ -1.76
HIPK3-204ENST00000525975 ZNF721Q8TF20 911 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 C10orf35Q96D05 121 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 SGCZQ96LD1 299 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 YPEL2Q96QA6 119 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 MRPL13Q9BYD1 178 aaKnown RBP4.03□□□□□ -1.76
HIPK3-204ENST00000525975 ZNF703Q9H7S9 590 aaPredicted RBP4.03□□□□□ -1.76
HIPK3-204ENST00000525975 NRN1Q9NPD7 142 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 PNRC2Q9NPJ4 139 aaKnown RBP4.03□□□□□ -1.76
HIPK3-204ENST00000525975 NAT8BQ9UHF3 227 aa4.03□□□□□ -1.76
HIPK3-204ENST00000525975 LOC105371242A0A075B767 164 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGKV1D-13A0A0B4J2D9 117 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGHV2-70DA0A0C4DH43 119 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 DPRXA6NFQ7 191 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SLC22A20A6NK97 555 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 NPIPA2E9PIF3 369 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 H3BMH7 237 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TOMM40O96008 361 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGKV1-13P0DP09 117 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 PSG2P11465 335 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TSPOP30536 169 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 CDC34P49427 236 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 RUNX3Q13761 415 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SLC25A47Q6Q0C1 308 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 C12orf76Q8N812 135 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 OR56B2PQ8NGI1 322 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IL1F10Q8WWZ1 152 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 PIGCQ92535 297 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 LOXL4Q96JB6 756 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 RALGAPA1Q6GYQ0 2036 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SPEGQ15772 3267 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 ADAMTS9Q9P2N4 1935 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TRAV30A0A087WSZ9 112 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 A0A0G2JRQ6 117 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 A0A1W2PRS3 328 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SH2D1BO14796 132 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SPINK4O60575 86 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 PGLYRP1O75594 196 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 NAPSAO96009 420 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGKV1D-33P01593 117 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGKV1-33P01594 117 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 IGKV3-11P04433 115 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SCTP09683 121 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 GLB1P16278 677 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 DRD1P21728 446 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 RBM11P57052 281 aaKnown RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 OCIAD2Q56VL3 154 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 LHX8Q68G74 356 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 ACSM6Q6P461 480 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 C16orf47Q6ZP98 133 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TMEM144Q7Z5S9 345 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 BCL2L2Q92843 193 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 MTIF3Q9H2K0 278 aaKnown RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 CST9LQ9H4G1 147 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 ESPL1Q14674 2120 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 COL4A6Q14031 1691 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 C17orf112F2Z3M2 114 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 CTXN2P0C2S0 81 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 YPEL3P61236 119 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SNAI3Q3KNW1 292 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 CRIP3Q6Q6R5 217 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 Q6ZSR6 202 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.02□□□□□ -1.77
HIPK3-204ENST00000525975 FAM131CQ96AQ9 280 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 SMIM12Q96EX1 92 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TMEM147Q9BVK8 224 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 CLN8Q9UBY8 286 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TIMM9Q9Y5J7 89 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TMEM131Q92545 1883 aa4.02□□□□□ -1.77
HIPK3-204ENST00000525975 TMEM238C9JI98 176 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 F2Z2F3 143 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 GPX1P07203 203 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 HOXB2P14652 356 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 EPHA8P29322 1005 aaPredicted RBP4.01□□□□□ -1.77
HIPK3-204ENST00000525975 ATP5G3P48201 142 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 LHX2P50458 406 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
HIPK3-204ENST00000525975 KMT5CQ86Y97 462 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 SAXO1Q8IYX7 474 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 OR10P1Q8NGE3 313 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 KLHDC7BQ96G42 594 aa4.01□□□□□ -1.77
HIPK3-204ENST00000525975 GMPPAQ96IJ6 420 aaPredicted RBP4.01□□□□□ -1.77
HIPK3-204ENST00000525975 OXGR1Q96P68 337 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms