RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PRO0461Q9UI25 63 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 POFUT2Q9Y2G5 429 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MRPS7Q9Y2R9 242 aaKnown RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 IER3IP1Q9Y5U9 82 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 DIDO1Q9BTC0 2240 aaKnown RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 DOPEY1Q5JWR5 2465 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ICE1Q9Y2F5 2266 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 NBPF19A0A087WUL8 3843 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 FREM1Q5H8C1 2179 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 IGLV1-36A0A0B4J1U3 117 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 A0A0G2JRQ6 117 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 PRSS37A4D1T9 235 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 METTL21EPA6NDL7 271 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 E7EQL1 145 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 H3BN98 237 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 DCTN6O00399 190 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ARPC3O15145 178 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SLC16A7O60669 478 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ZNF780AO75290 641 aaPredicted RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 NDUFS6O75380 124 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 CA11O75493 328 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 UBL3O95164 117 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 FARS2O95363 451 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 SNAP29O95721 258 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 RAB36O95755 333 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 APOC1P02654 83 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SOD3P08294 240 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 CST2P09228 141 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 GNAO1P09471 354 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR8G3PP0DMU2 310 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 PSKH1P11801 424 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 CD79AP11912 226 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 HIST1H1CP16403 213 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 ZNF14P17017 642 aaPredicted RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 ZNF32P17041 273 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 NPR2P20594 1047 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 LAP3P28838 519 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 CALCRP30988 508 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ARR3P36575 388 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 P2RY1P47900 373 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 GNG10P50151 68 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 DAPP51397 102 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 GPM6AP51674 278 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 GNG2P59768 71 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SLAQ13239 276 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 IL18Q14116 193 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ENDOGQ14249 297 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 USF2Q15853 346 aaPredicted RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 PGGHGQ32M88 737 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 NSUN5P1Q3KNT7 163 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SLC36A2Q495M3 483 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 FAM27BQ5VT28 67 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 PYHIN1Q6K0P9 492 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 FAHD1Q6P587 224 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 DNM1P34Q6PK57 102 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 UGT2A3Q6UWM9 527 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SLC16A14Q7RTX9 510 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 LHFPL3Q86UP9 236 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ENTHD1Q8IYW4 607 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 ASCC1Q8N9N2 400 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 C20orf203Q8NBC4 194 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 CYB561A3Q8NBI2 242 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 BPIFCQ8NFQ6 507 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR52E2Q8NGJ4 325 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR6Q1Q8NGQ2 317 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR9Q1Q8NGQ5 310 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR4K13Q8NH42 304 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR1F12Q8NHA8 337 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR5K1Q8NHB7 308 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 DTD1Q8TEA8 209 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 C11orf40Q8WZ69 217 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 RBP7Q96R05 134 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 MBOAT4Q96T53 435 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 NMNAT3Q96T66 252 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 NIPSNAP3BQ9BS92 247 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 TSSK6Q9BXA6 273 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 BCL2L14Q9BZR8 327 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 SELENOIQ9C0D9 397 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 RACGAP1Q9H0H5 632 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 VCXQ9H320 206 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 OR51B6Q9H340 312 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 POLE4Q9NR33 117 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 PEF1Q9UBV8 284 aaKnown RBP2.6□□□□□ -1.99
CD44-219ENST00000525685 NUP50Q9UKX7 468 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 BAIAP2Q9UQB8 552 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 AP4S1Q9Y587 144 aa2.6□□□□□ -1.99
CD44-219ENST00000525685 NBASA2RRP1 2371 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GCN1Q92616 2671 aaKnown RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 IGHV3OR16-13A0A075B7E8 117 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 IGHV2OR16-5A0A0B4J2B6 119 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 BTBD17A6NE02 478 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 TVP23AA6NH52 213 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 FAM183AA6NL82 134 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RIIAD1A6NNX1 92 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 C12orf71A8MTZ7 269 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ANKRD65E5RJM6 399 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 G3V2T6 193 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ZNF701M0R085 212 aaPredicted RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 M0R129 80 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms