RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PRSS54Q6PEW0 395 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 SBSNQ6UWP8 590 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 C5orf46Q6UWT4 87 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 Q6ZR03 302 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 GLT6D1Q7Z4J2 308 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 MKXQ8IYA7 352 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 DEFB125Q8N687 156 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 SLC25A44Q96H78 314 aaPredicted RBP3.17□□□□□ -1.9
USP47-206ENST00000525367 SFRP2Q96HF1 295 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 ENY2Q9NPA8 101 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 ARMC1Q9NVT9 282 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 TAS2R1Q9NYW7 299 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 DNMT1P26358 1616 aaKnown RBP3.16□□□□□ -1.9
USP47-206ENST00000525367 IGLV4-69A0A075B6H9 119 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 IGHV3-43A0A0B4J1X8 118 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 LEUTXA8MZ59 168 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 C2orf74A8MZ97 194 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 BHLHE40O14503 412 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 KLRC4O43908 158 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 NRASP01111 189 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 HRASP01112 189 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 KRASP01116 189 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 TTRP02766 147 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 PTHLHP12272 177 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 CA7P43166 264 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 TMEM33P57088 247 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 PSG4Q00888 419 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 FABP9Q0Z7S8 132 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ARHGAP11BQ3KRB8 267 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 HES3Q5TGS1 186 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 TAC4Q86UU9 113 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 C20orf196Q8IYI0 205 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ZNF101Q8IZC7 436 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 TBC1D19Q8N5T2 526 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ZNF676Q8N7Q3 588 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ZNF680Q8NEM1 530 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 KCTD4Q8WVF5 259 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
USP47-206ENST00000525367 CMBLQ96DG6 245 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 MS4A6EQ96DS6 147 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 RMI2Q96E14 147 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 INIPQ9NRY2 104 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 KCNIP2Q9NS61 270 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 OPTCQ9UBM4 332 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 CARHSP1Q9Y2V2 147 aaKnown RBP3.16□□□□□ -1.9
USP47-206ENST00000525367 PXMP4Q9Y6I8 212 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 CCDC144AA2RUR9 1427 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 DYSFO75923 2080 aa3.16□□□□□ -1.9
USP47-206ENST00000525367 IGHV3-21A0A0B4J1V1 117 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 GOLGA6L4A6NEF3 574 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 OR4C46A6NHA9 309 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 OR5H14A6NHG9 310 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 C4orf51C9J302 202 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 GPR75O95800 540 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 GUSBP08236 651 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 OR5AC1P0C628 307 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 DNAH10OSP0CZ25 163 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 CDK2P24941 298 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 BTN3A2P78410 334 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 SP6Q3SY56 376 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 ZCWPW2Q504Y3 356 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 AMN1Q8IY45 258 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 KRTCAP2Q8N6L1 136 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 Q8N7P7 452 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 LY6G5BQ8NDX9 201 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 OR4A5Q8NH83 315 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 RAD51AP1Q96B01 352 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 PPP1R2P1Q96PQ5 205 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 KLF6Q99612 283 aaPredicted RBP3.15□□□□□ -1.91
USP47-206ENST00000525367 HOPXQ9BPY8 73 aaPredicted RBP3.15□□□□□ -1.91
USP47-206ENST00000525367 SHANK2-AS3Q9BTD1 123 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 ALX4Q9H161 411 aaPredicted RBP3.15□□□□□ -1.91
USP47-206ENST00000525367 ZNF430Q9H8G1 570 aaPredicted RBP3.15□□□□□ -1.91
USP47-206ENST00000525367 FAM60AQ9NP50 221 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 NYAP2Q9P242 653 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 VPREB3Q9UKI3 123 aa3.15□□□□□ -1.91
USP47-206ENST00000525367 LTBP1Q14766 1721 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 IGHV3OR15-7A0A075B7D8 119 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 A0A1B0GV72 72 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 GNG14A0A1W2PPG7 69 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 OR4C45A6NMZ5 311 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 C15orf65H3BRN8 121 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 M0R381 172 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PDE6DO43924 150 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 IGLV3-27P01718 113 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 GYPCP04921 128 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 HLA-DQB2P05538 268 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 FGF6P10767 208 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 NTF3P20783 257 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 OR10J1P30954 320 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PPP1CCP36873 323 aaKnown RBP3.14□□□□□ -1.91
USP47-206ENST00000525367 MPV17P39210 176 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PLPPR5Q32ZL2 321 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 TEX36Q5VZQ5 186 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 ALKAL1Q6UXT8 129 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms