RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ARPC5O15511 151 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SPINT2O43291 252 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 BCL2L11O43521 198 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 PSPNO60542 156 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 ATG12O94817 140 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SIX6O95475 246 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 IGHV1-46P01743 117 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 RLN2P04090 185 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SCTP09683 121 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 MMP9P14780 707 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 CXCL2P19875 107 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 VDAC1P21796 283 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 F2RP25116 425 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 DUSP1P28562 367 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 PRDX2P32119 198 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 ARHGDIBP52566 201 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SNRPD2P62316 118 aaKnown RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 EIF5AP63241 154 aaKnown RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 TNFAIP6P98066 277 aaPredicted RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 SMCO1Q147U7 214 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SLC9A3R2Q15599 337 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 IAH1Q2TAA2 248 aaPredicted RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 Q3ZCU0 254 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 STUMQ69YW2 141 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 TMUB2Q71RG4 321 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 FAM219AQ8IW50 185 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 FAM71E2Q8N5Q1 922 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 OR10A7Q8NGE5 316 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 OR8H1Q8NGG4 311 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 OR10V1Q8NGI7 309 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 ANGPTL6Q8NI99 470 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 LRRC20Q8TCA0 184 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 GLYATL2Q8WU03 294 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 RBPMSQ93062 196 aaKnown RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 REG4Q9BYZ8 158 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SLC5A7Q9GZV3 580 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SHARPINQ9H0F6 387 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 ARL6Q9H0F7 186 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 MS4A5Q9H3V2 200 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 PLEKHA2Q9HB19 425 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 TAF9BQ9HBM6 251 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 GCM1Q9NP62 436 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 JPT1Q9UK76 154 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 AUP1Q9Y679 476 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 ACANP16112 2415 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 IGKV1D-17A0A075B6S4 117 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 KANTRA0A1W2PQU2 76 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 LINC00862A6NCI5 91 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 E5RGE8 158 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 LYNX1G3V0Z9 82 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 F2RL2O00254 374 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 NDUFA2O43678 99 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 DEDDO75618 318 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 LY86O95711 162 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 GAPDHP04406 335 aaKnown RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 OR5AC1P0C628 307 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 LYNX1P0DP58 116 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 PSG2P11465 335 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 IRF2P14316 349 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 FOSL1P15407 271 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 RCC1P18754 421 aaPredicted RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 PI3P19957 117 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 P2RX3P56373 397 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 FXYD4P59646 89 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 RAB14P61106 215 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 COL10A1Q03692 680 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 ATXN7L3Q14CW9 347 aaPredicted RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 PDCD1Q15116 288 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 NMSQ5H8A3 153 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 GPR157Q5UAW9 335 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 PRAMEF6Q5VXH4 476 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 GGNBP1Q5YKI7 109 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 EIF5AL1Q6IS14 154 aaKnown RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 CLEC2AQ6UVW9 174 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 ZNF818PQ6ZRF7 136 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 TBC1D26Q86UD7 250 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 ZNF645Q8N7E2 425 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 OR52M1Q8NGK5 317 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 CD300LFQ8TDQ1 290 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 SCARB1Q8WTV0 552 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 CORO2AQ92828 525 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 LSM10Q969L4 123 aaKnown RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 COQ2Q96H96 371 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 BARX1Q9HBU1 254 aaPredicted RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 DYNLRB1Q9NP97 96 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 COA4Q9NYJ1 87 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 RDH8Q9NYR8 311 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 GAB2Q9UQC2 676 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 PPP1R3CQ9UQK1 317 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 NSG2Q9Y328 171 aa5.87□□□□□ -1.47
VPS11-201ENST00000524454 YLPM1P49750 1951 aaKnown RBP5.87□□□□□ -1.47
VPS11-201ENST00000524454 A0A096LNT2 108 aa5.86□□□□□ -1.47
VPS11-201ENST00000524454 TRAV38-1A0A0B4J264 116 aa5.86□□□□□ -1.47
VPS11-201ENST00000524454 A0A1B0GU03 582 aa5.86□□□□□ -1.47
VPS11-201ENST00000524454 ODAMA1E959 279 aa5.86□□□□□ -1.47
VPS11-201ENST00000524454 FAM90A9PA6NNJ1 464 aa5.86□□□□□ -1.47
VPS11-201ENST00000524454 FAM25EA8MYX2 175 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms