RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SEC14L6B5MCN3 397 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 J3QT63 122 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 MRASO14807 208 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 ZW10O43264 779 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 TRAPPC6AO75865 159 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 TNFP01375 233 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 IGLV2-8P01709 118 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 CD28P10747 220 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 SPTBP11277 2137 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 HLA-GP17693 338 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 NELFEP18615 380 aaKnown RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 HLA-DMAP28067 261 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 IMPA1P29218 277 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 CA5AP35218 305 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 NUDT2P50583 147 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 POLR2JP52435 117 aaKnown RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 FOXA1P55317 472 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 RBX1P62877 108 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 GRB2P62993 217 aaKnown RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 RELAQ04206 551 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 PRDX1Q06830 199 aaKnown RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 SPIN4Q56A73 249 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 KDM4DQ6B0I6 523 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 RPS27LQ71UM5 84 aaKnown RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 PAGE2Q7Z2X7 111 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 PDPNQ86YL7 162 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 DEFB107AQ8IZN7 70 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 DEFB123Q8N688 67 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 NATD1Q8N6N6 113 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 OR8J3Q8NGG0 315 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 OR51A7Q8NH64 312 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 KLF14Q8TD94 323 aaPredicted RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 ORAOV1Q8WV07 137 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 MITD1Q8WV92 249 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 CLDN23Q96B33 292 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 TESCQ96BS2 214 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 S100PBPQ96BU1 408 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 PPP1R36Q96LQ0 422 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 FAM19A4Q96LR4 140 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 ZFP3Q96NJ6 502 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 CATSPER2Q96P56 530 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 DPY30Q9C005 99 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 OR52A5Q9H2C5 316 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 VCX3BQ9H321 246 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 RNF11Q9Y3C5 154 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 TIMM22Q9Y584 194 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 ORC6Q9Y5N6 252 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 RP1P56715 2156 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 TICRRQ7Z2Z1 1910 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 PLXNB3Q9ULL4 1909 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 NINQ8N4C6 2090 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 ASXL3Q9C0F0 2248 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 IGHV6-1A0A0B4J1U7 121 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 SPTY2D1-AS1A0A0U1RR47 76 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 GNG14A0A1W2PPG7 69 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 EVPLLA8MZ36 301 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 C10orf142B7Z368 130 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 TXNDC9O14530 226 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 TCAPO15273 167 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 GATCO43716 136 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 NDUFS5O43920 106 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 ATP6V1G2O95670 118 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 PDYNP01213 254 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 OR5AL1P0C617 328 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 CTSEP14091 401 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 PTNP21246 168 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 PPIBP23284 216 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 CMPK1P30085 196 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 S100A3P33764 101 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NUP62P37198 522 aaPredicted RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 ACTR1BP42025 376 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 PSME3P61289 254 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 TBPL1P62380 186 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 RPL38P63173 70 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 SKP1P63208 163 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 ATP5G2Q06055 141 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 BNIP2Q12982 314 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 FLOT2Q14254 428 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 ELOCQ15369 112 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 C18orf21Q32NC0 220 aaPredicted RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 CDNFQ49AH0 187 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NKAIN1Q4KMZ8 207 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 FBXO48Q5FWF7 155 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 TTC32Q5I0X7 151 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 FAM27D1Q5T7N8 215 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NIPAL1Q6NVV3 410 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NOXRED1Q6NXP6 359 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 C16orf87Q6PH81 154 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 SCIMPQ6UWF3 145 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 OOSP2Q86WS3 158 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 DHFR2Q86XF0 187 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 GKN2Q86XP6 184 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 FUNDC1Q8IVP5 155 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 TRIML2Q8N7C3 387 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 SLC26A10Q8NG04 563 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 OR8J2Q8NGG1 315 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 OR1P1Q8NH06 330 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms