RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 SNRNP70P08621 437 aaKnown RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF44P15621 663 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 PRDX2P32119 198 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 BTCP35070 178 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 RCVRNP35243 200 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 CBX5P45973 191 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 RFX2P48378 723 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 DYRK1AQ13627 763 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 ARFRP1Q13795 201 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 OXA1LQ15070 435 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 LRRC10Q5BKY1 277 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF880Q6PDB4 577 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 GDPD3Q7L5L3 318 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 HOGA1Q86XE5 327 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 GAPTQ8N292 157 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 TOMM5Q8N4H5 51 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 MRPL30Q8TCC3 161 aaKnown RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 CHPT1Q8WUD6 406 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 SNAPC3Q92966 411 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 CMSS1Q9BQ75 279 aaKnown RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 DPCDQ9BVM2 203 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 SPACA1Q9HBV2 294 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 HRASLSQ9HDD0 168 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 SLC25A10Q9UBX3 287 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF107Q9UII5 783 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-209ENST00000520630 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
CSMD1-209ENST00000520630 TRBV6-6A0A0A6YYG2 114 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 ODF3BA8MYP8 253 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 SIGLEC5O15389 551 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 LYRM1O43325 122 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 CD74P04233 296 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 CD3DP04234 171 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 FCGR3AP08637 254 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF735P0CB33 412 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 GSTT2BP0CG30 244 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 NDUFB7P17568 137 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 DTYMKP23919 212 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 OR3A1P47881 315 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 LUMP51884 338 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 ACTBP60709 375 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 RBM39Q14498 530 aaKnown RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 PAN3Q58A45 887 aaKnown RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 OR52W1Q6IF63 320 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 C5orf24Q7Z6I8 188 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 CENPVQ7Z7K6 275 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 CENPSQ8N2Z9 138 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 OR4D10Q8NGI6 311 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 OR4C16Q8NGL9 310 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 DPF1Q92782 380 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 SDSLQ96GA7 329 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 C7orf50Q9BRJ6 194 aaKnown RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 CHST6Q9GZX3 395 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 ETAA1Q9NY74 926 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 GLS2Q9UI32 602 aa6.31□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF230Q9UIE0 474 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-209ENST00000520630 VPS13DQ5THJ4 4388 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 RBMY1BA6NDE4 496 aaKnown RBP6.3□□□□□ -1.4
CSMD1-209ENST00000520630 RBMY1EA6NEQ0 496 aaKnown RBP6.3□□□□□ -1.4
CSMD1-209ENST00000520630 M0QYG6 137 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 HSPB6O14558 160 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 RAMP3O60896 148 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 PEX14O75381 377 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 PTTG1O95997 202 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 MT-ND4P03905 459 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 RBMY1DP0C7P1 496 aaKnown RBP6.3□□□□□ -1.4
CSMD1-209ENST00000520630 AKAIN1P0CW23 69 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 HLA-DMAP28067 261 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 GABRA2P47869 451 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 INPP1P49441 399 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 DLX6P56179 175 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 TAS2R19P59542 299 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 DEFA1P59665 94 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 DEFA3P59666 94 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 AP3S2P59780 193 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 PAX5Q02548 391 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 SRSF7Q16629 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSMD1-209ENST00000520630 RSBN1Q5VWQ0 802 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-209ENST00000520630 FAAP20Q6NZ36 180 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 STEAP1BQ6NZ63 245 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 ZNF497Q6ZNH5 498 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 Q6ZNX1 250 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 Q6ZS49 121 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 C8orf86Q6ZUL3 223 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 NRARPQ7Z6K4 114 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 FAM185AQ8N0U4 392 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 ZNRF1Q8ND25 227 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 DUSP18Q8NEJ0 188 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 BEST4Q8NFU0 473 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 OR5D13Q8NGL4 314 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 NEK7Q8TDX7 302 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 DEDD2Q8WXF8 326 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 COQ2Q96H96 371 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 SNX22Q96L94 193 aa6.3□□□□□ -1.4
CSMD1-209ENST00000520630 ST6GALNAC5Q9BVH7 336 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms