RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 LCE3CQ5T5A8 94 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 KPRPQ5T749 579 aaPredicted RBP0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR10K2Q6IF99 312 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 SLC25A34Q6PIV7 304 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 FAM131AQ6UXB0 335 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 HIST2H3AQ71DI3 136 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 TCF23Q7RTU1 214 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 LRP11Q86VZ4 500 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 LRRC34Q8IZ02 419 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZFAND2AQ8N6M9 145 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR2D3Q8NGH3 330 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR4A5Q8NH83 315 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 ZNRF2Q8NHG8 242 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 CDC26Q8NHZ8 85 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 PHOSPHO2Q8TCD6 241 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 EEF1AKMT1Q8WVE0 214 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 DEDD2Q8WXF8 326 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 ANP32BQ92688 251 aaKnown RBP0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 SLC35B4Q969S0 331 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 ANKRD36BP1Q96IX9 119 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 LINC00477Q96M19 166 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 MED18Q9BUE0 208 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 C9orf16Q9BUW7 83 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 SCRT1Q9BWW7 348 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 NKX6-2Q9C056 277 aaPredicted RBP0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 TLNRD1Q9H1K6 362 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 OR51I1Q9H343 314 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 FKBP14Q9NWM8 211 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 MRPS16Q9Y3D3 137 aaKnown RBP0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 HDGFL3Q9Y3E1 203 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 PCYT1BQ9Y5K3 369 aaPredicted RBP0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 FLT4P35916 1363 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 KIF15Q9NS87 1388 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 NCOA1Q15788 1441 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 SLIT3O75094 1523 aa0.78□□□□□ -2.28
RN7SKP88-201ENST00000516847 DICER1Q9UPY3 1922 aaKnown RBP0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 OTOFQ9HC10 1997 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 TRBV24-1A0A075B6N3 115 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 IGKV1OR2-108A0A075B7D4 117 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 IGKV1-12A0A0C4DH73 117 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 PQLC2LA1A4F0 135 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 CLDN24A6NM45 220 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF729A6NN14 1252 aaPredicted RBP0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 COLCA2A8K830 154 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 CYSRT1A8MQ03 144 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 A8MWP4 228 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 EVPLLA8MZ36 301 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 C4orf51C9J302 202 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 H3BMM0 161 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 H3BQ85 93 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 RPL36A-HNRNPH2H7BZ11 118 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 MRASO14807 208 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 FADS1O60427 444 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 SH2D1AO60880 128 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR2B3O76000 313 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 APOMO95445 188 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 IGKV1D-12P01611 117 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 TTRP02766 147 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 OPN1SWP03999 348 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 GYPCP04921 128 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 REG1AP05451 166 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 FAM228BP0C875 321 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 INAFM2P0DMQ5 153 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF708P17019 499 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ORM2P19652 201 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ATP6V0CP27449 155 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 GABRA3P34903 492 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 TGFBR2P37173 567 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 REG1BP48304 166 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 FOXA1P55317 472 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 LINC00313P59037 77 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 KRTAP10-6P60371 365 aaPredicted RBP0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 SPCS3P61009 180 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 PSME3P61289 254 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 FKBP1AP62942 108 aaKnown RBP0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 BTN3A2P78410 334 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 CAV1Q03135 178 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 BIKQ13323 160 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 PMAIP1Q13794 54 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 PDGFRLQ15198 375 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 RSU1Q15404 277 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 SPA17Q15506 151 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 OR8G1Q15617 311 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ACOT6Q3I5F7 207 aaPredicted RBP0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 TMEM97Q5BJF2 176 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 SPIN3Q5JUX0 258 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 DNLZQ5SXM8 178 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 FAM201AQ5SY85 155 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 C10orf91Q5T1B1 145 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 C1orf194Q5T5A4 169 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 SBSNQ6UWP8 590 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ATP5L2Q7Z4Y8 100 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 HMGN2P46Q86SG4 172 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 KRTAP11-1Q8IUC1 163 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF567Q8N184 647 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 KRT222Q8N1A0 295 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 ZNF664Q8N3J9 261 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 TMEM86BQ8N661 226 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 DEFB125Q8N687 156 aa0.77□□□□□ -2.29
RN7SKP88-201ENST00000516847 UBL4BQ8N7F7 174 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms