RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PLEKHF1Q96S99 279 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SERPINI1Q99574 410 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SNHG12Q9BXW3 62 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 EBPLQ9BY08 206 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HES7Q9BYE0 225 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 DCSTAMPQ9H295 470 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TMEM27Q9HBJ8 222 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ANKHQ9HCJ1 492 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 BFARQ9NZS9 450 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 LGALS13Q9UHV8 139 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PRO0628Q9UI54 55 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ZNF223Q9UK11 482 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HS3ST2Q9Y278 367 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 YARS2Q9Y2Z4 477 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 NCOA6Q14686 2063 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 CHD3Q12873 2000 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TNRC6AQ8NDV7 1962 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 WI2-2373I1.2A0A1W2PRP0 233 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 M0R3G1 203 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SIRPB1O00241 398 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 NME4O00746 187 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 CDC40O60508 579 aaKnown RBP eCLIP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 FARS2O95363 451 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HPRT1P00492 218 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 P04436 131 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TYMSP04818 313 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 LIMS3P0CW19 117 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 LIMS4P0CW20 117 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 CRISP1P54107 249 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 BIDP55957 195 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ESRRGP62508 458 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PSG9Q00887 426 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 UNC119Q13432 240 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 EDDM3AQ14507 147 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PAFAH1B3Q15102 231 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TRIP13Q15645 432 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 RNF212Q495C1 297 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TP53I3Q53FA7 332 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TRMT12Q53H54 448 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HIST2H3PS2Q5TEC6 136 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TMEM205Q6UW68 189 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SCIMPQ6UWF3 145 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 MBOAT2Q6ZWT7 520 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 MOB1BQ7L9L4 216 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SPAG16Q8N0X2 631 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 C15orf56Q8N910 161 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 OR4C13Q8NGP0 309 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 OR56B4Q8NH76 319 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 UCN3Q969E3 161 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TMEM203Q969S6 136 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PTX4Q96A99 478 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SDSLQ96GA7 329 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PAGE5Q96GU1 130 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 COL21A1Q96P44 957 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ULBP1Q9BZM6 244 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 RPP21Q9H633 154 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 RHOFQ9HBH0 211 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 NMRAL1Q9HBL8 299 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 GLTPQ9NZD2 209 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 MRPL27Q9P0M9 148 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 CLCF1Q9UBD9 225 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 FLVCR2Q9UPI3 526 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PRG3Q9Y2Y8 225 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 UBIAD1Q9Y5Z9 338 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SPRR5A0A1B0GTR4 108 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TINCRA0A1B0GVN0 87 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 A0A1W2PRE2 83 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TMEM150BA6NC51 233 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 A6NDN8 102 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ZNF593O00488 134 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 BHLHE40O14503 412 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PHF1O43189 567 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 MFSD11O43934 449 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 SLC16A7O60669 478 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PGLYRP1O75594 196 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PSMG1O95456 288 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TDP2O95551 362 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TTC4O95801 387 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PFN1P07737 140 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 BPGMP07738 259 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 OR8U9P0C7N5 309 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 CXCR1P25024 350 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HTR1DP28221 377 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 DDTP30046 118 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 HSPA9P38646 679 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 RPL13AP40429 203 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 GPR1P46091 355 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 DAP3P51398 398 aaKnown RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 UBE2E1P51965 193 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 UGT2B15P54855 530 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 FBXW4P57775 412 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 MAXP61244 160 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 RRAS2P62070 204 aaPredicted RBP1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 FMODQ06828 376 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 ZNF235Q14590 738 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 OR8G1Q15617 311 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 TTLL9Q3SXZ7 439 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 VPS26BQ4G0F5 336 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 C1orf100Q5SVJ3 147 aa1.11□□□□□ -2.23
AC025539.1-201ENST00000515343 PRSS54Q6PEW0 395 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms