RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 GRIFINA4D1Z8 144 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 DUSP15Q9H1R2 295 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 H0Y980 276 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 HLA-DRB1P01911 266 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 KIAA1644Q3SXP7 199 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 RASL10BQ96S79 203 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 WISP3O95389 354 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-214ENST00000515035 BTF3P20290 206 aaKnown RBP11.54□□□□□ -0.56
TCOF1-214ENST00000515035 LGALS7P47929 136 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 TGIF1Q15583 401 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 COA4Q9NYJ1 87 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 OR2A4O95047 310 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 DANCRP0C864 163 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
TCOF1-214ENST00000515035 TMEM183AQ8IXX5 376 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 PRSS27Q9BQR3 290 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 SMOC1Q9H4F8 434 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
TCOF1-214ENST00000515035 CEP290O15078 2479 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-214ENST00000515035 A0A1B0GV72 72 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 ADIPOQQ15848 244 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 LINC00596Q86U02 117 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 OR2J1Q9GZK6 312 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 SCN4AP35499 1836 aa11.54□□□□□ -0.56
TCOF1-214ENST00000515035 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 PPIHO43447 177 aaKnown RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 TMEM108Q6UXF1 575 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 ERASQ7Z444 233 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 OR2I1PQ8NGU4 316 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 FHITP49789 147 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 TWIST1Q15672 202 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 NUDT16L1Q9BRJ7 211 aaKnown RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 RGPD4Q7Z3J3 1758 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 HYPMO75409 117 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 ZNF324O75467 553 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 CKS2P33552 79 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 TMEM45BQ96B21 275 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 PCOLCE2Q9UKZ9 415 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 OR51B2Q9Y5P1 312 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 AMY1AP04745 511 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 APELAP0DMC3 54 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 NPBWR2P48146 333 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 LRRC75BQ2VPJ9 315 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 PQLC2Q6ZP29 291 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 LSM10Q969L4 123 aaKnown RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 LIMS1P48059 325 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 EMP1P54849 157 aa11.53□□□□□ -0.56
TCOF1-214ENST00000515035 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 SF3B6Q9Y3B4 125 aaKnown RBP11.53□□□□□ -0.56
TCOF1-214ENST00000515035 TRIP11Q15643 1979 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 ZNF729A6NN14 1252 aaPredicted RBP11.52□□□□□ -0.56
TCOF1-214ENST00000515035 FXYD3Q14802 87 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 SFTPA2Q8IWL1 248 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 TUSC5Q8IXB3 177 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 UCN2Q96RP3 112 aa11.52□□□□□ -0.56
TCOF1-214ENST00000515035 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 TMEM189A5PLL7 270 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 HPRT1P00492 218 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 CELA2BP08218 269 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-214ENST00000515035 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 PRF1P14222 555 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 MRPL13Q9BYD1 178 aaKnown RBP11.52□□□□□ -0.57
TCOF1-214ENST00000515035 RBKSQ9H477 322 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 SPTBP11277 2137 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 HTN1P15515 57 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
TCOF1-214ENST00000515035 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
TCOF1-214ENST00000515035 DSPPQ9NZW4 1301 aa11.52□□□□□ -0.57
TCOF1-214ENST00000515035 DNPH1O43598 174 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 C1orf100Q5SVJ3 147 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 MCM3APO60318 1980 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 SVILO95425 2214 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 A0A1W2PPV9 198 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 MOSPD3O75425 235 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 MAS1LP35410 378 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 ZFP36L2P47974 494 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms