RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TMEM219Q86XT9 240 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 LDLRAD3Q86YD5 345 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 ODF3L1Q8IXM7 274 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 OR56B4Q8NH76 319 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 GPX8Q8TED1 209 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 RPEQ96AT9 228 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 C5orf30Q96GV9 206 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 SSX3Q99909 188 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 GINS4Q9BRT9 223 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 CHIAQ9BZP6 476 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 C11orf54Q9H0W9 315 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 RNF150Q9ULK6 438 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 ANAPC10Q9UM13 185 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.15
TOPBP1-209ENST00000513818 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 TIMM23O14925 209 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 IFNA2P01563 188 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 PMP2P02689 132 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 HLA-DMAP28067 261 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 IER3P46695 156 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 LINC00205P59089 165 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 FAM131AQ6UXB0 335 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 LINC00311Q8N616 119 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 OR10J5Q8NHC4 309 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 MALSU1Q96EH3 234 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 MRPL20Q9BYC9 149 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 MMP27Q9H306 513 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 PRDM13Q9H4Q3 707 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 KLK11Q9UBX7 282 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 V9GYH0 126 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
TOPBP1-209ENST00000513818 IGKV1D-13A0A0B4J2D9 117 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 IGHV1-3A0A0C4DH29 117 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 FABP12A6NFH5 140 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF736B4DX44 427 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 M0QYG6 137 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 CHST1O43916 411 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 RGS11O94810 467 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 OR8U9P0C7N5 309 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 IGKV1-13P0DP09 117 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 AADACP22760 399 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 IL3RAP26951 378 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 S100A5P33763 92 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 RCVRNP35243 200 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 HRH1P35367 487 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 CEACAM3P40198 252 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 CBX5P45973 191 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 FXYD4P59646 89 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF79Q15937 498 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 SRSF7Q16629 238 aaKnown RBP eCLIP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 Q3ZCU0 254 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 PYHIN1Q6K0P9 492 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 FAAP20Q6NZ36 180 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 MZT2BQ6NZ67 158 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 GLDNQ6ZMI3 551 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 MOB3BQ86TA1 216 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 TGIF2LXQ8IUE1 241 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 H1FOOQ8IZA3 346 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 C8orf31Q8N9H6 132 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 OR6Q1Q8NGQ2 317 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 OR8U1Q8NH10 309 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 PIFOQ8TCI5 191 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 SSMEM1Q8WWF3 244 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 CAPSLQ8WWF8 208 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 RTN4IP1Q8WWV3 396 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 CFHR4Q92496 578 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 ST6GALNAC6Q969X2 333 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF251Q9BRH9 671 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 MEGF9Q9H1U4 602 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 OR2D2Q9H210 308 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 SCPEP1Q9HB40 452 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 ABCB10Q9NRK6 738 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 EHFQ9NZC4 300 aa7.88□□□□□ -1.15
TOPBP1-209ENST00000513818 BTBD17A6NE02 478 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 J3KRW8 73 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 LANCL1O43813 399 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 GPR137BO60478 399 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 SNRNP70P08621 437 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 FCGR2CP31995 323 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 GPR12P47775 334 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 RFX2P48378 723 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF137PP52743 207 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 RIPPLY3P57055 190 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF816Q0VGE8 651 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 HNF4GQ14541 408 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 CDK10Q15131 360 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 CCBE1Q6UXH8 406 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF833PQ6ZTB9 187 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 CCDC190Q86UF4 302 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 TMEM17Q86X19 198 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 LYSMD2Q8IV50 215 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 DRAXINQ8NBI3 349 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 OR5AP2Q8NGF4 316 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 OR5H2Q8NGV7 314 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms