RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PRIMA1	Q86XR5	153 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107		Q8N402	240 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	OR8U1	Q8NH10	309 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	OR10J5	Q8NHC4	309 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	DUX5	Q96PT3	197 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	FXYD6	Q9H0Q3	95 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	MEGF9	Q9H1U4	602 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	EHF	Q9NZC4	300 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	DPM3	Q9P2X0	92 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	TBL2	Q9Y4P3	447 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	ITGB1BP1	O14713	200 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	VENTX	O95231	258 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	DIRAS3	O95661	229 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	IGHV4-59	P01825	116 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF137P	P52743	207 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	MRPS10	P82664	201 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	IFITM3	Q01628	133 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	LSAMP	Q13449	338 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.71	□□□□□ -0.53
MATR3-238	ENST00000512107		Q3ZCU0	254 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	MINOS1	Q5TGZ0	78 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	DHRS11	Q6UWP2	260 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.71	□□□□□ -0.53
MATR3-238	ENST00000512107		Q6YL49	198 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF833P	Q6ZTB9	187 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	ZDHHC22	Q8N966	263 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	OR2AK2	Q8NG84	335 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	OR4C16	Q8NGL9	310 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	OR5H2	Q8NGV7	314 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	OR10X1	Q8NGY0	326 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	OR56B4	Q8NH76	319 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	CFHR4	Q92496	578 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	GINS4	Q9BRT9	223 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	MRPL20	Q9BYC9	149 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	NECAP2	Q9NVZ3	263 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	MINOS1-NBL1	R4GNA1	71 aa		11.71	□□□□□ -0.53
MATR3-238	ENST00000512107	IGHV3-72	A0A0B4J1Y9	119 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	OR5H14	A6NHG9	310 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	LGALS4	P56470	323 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	VAX1	Q5SQQ9	334 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	AADACL3	Q5VUY0	350 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	STEAP1B	Q6NZ63	245 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	C15orf40	Q8WUR7	153 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	GIMAP1	Q8WWP7	306 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	MALSU1	Q96EH3	234 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	OR2D2	Q9H210	308 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	CCL28	Q9NRJ3	127 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	TNFRSF19	Q9NS68	423 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	SDHAF2	Q9NX18	166 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	RABL2B	Q9UNT1	228 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	OR2W1	Q9Y3N9	320 aa		11.7	□□□□□ -0.54
MATR3-238	ENST00000512107	LEUTX	A8MZ59	168 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	HSD17B6	O14756	317 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	TIMM23	O14925	209 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	HOXA3	O43365	443 aa	Predicted RBP	11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	RGS11	O94810	467 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	PPY	P01298	95 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	CTXN2	P0C2S0	81 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	CT45A6	P0DMU7	189 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	CT45A5	P0DMU8	189 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	CT45A7	P0DMV0	189 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	IL7	P13232	177 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	IER3	P46695	156 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	BPIFB3	P59826	476 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	ZNF45	Q02386	682 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	LINC00299	Q6ZSB3	139 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	LHFPL1	Q86WI0	220 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	DRAM1	Q8N682	238 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	GDPD1	Q8N9F7	314 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	RITA1	Q96K30	269 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	NABP2	Q9BQ15	211 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	HRASLS	Q9HDD0	168 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	RAB9B	Q9NP90	201 aa		11.69	□□□□□ -0.54
MATR3-238	ENST00000512107	IGHV1-3	A0A0C4DH29	117 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	LINC00854	A0A1B0GVQ3	168 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	PLA2G10	O15496	165 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	RAB3D	O95716	219 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	CD40LG	P29965	261 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	BRWD1-AS2	P59051	145 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	TAS2R46	P59540	309 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	TAS2R19	P59542	299 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	FXYD4	P59646	89 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	ACTB	P60709	375 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	RPL30	P62888	115 aa	Known RBP	11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	ACTG1	P63261	375 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	SSBP1	Q04837	148 aa	Known RBP	11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	SLC9A3R2	Q15599	337 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	ZNF383	Q8NA42	475 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	OR13C8	Q8NGS7	320 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	TOMM40L	Q969M1	308 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	MOB3A	Q96BX8	217 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	SSX3	Q99909	188 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	OCEL1	Q9H607	264 aa		11.68	□□□□□ -0.54
MATR3-238	ENST00000512107	DNAJC9-AS1	A6NH13	148 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms