RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 B3GNTL1Q67FW5 361 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 AWAT2Q6E213 333 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 DHRS11Q6UWP2 260 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TOMM20LQ6UXN7 152 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR8I2Q8N0Y5 310 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR1S1Q8NH92 325 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 FGFBP3Q8TAT2 258 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF417Q8TAU3 575 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 RDH5Q92781 318 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF501Q96CX3 271 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF587Q96SQ5 575 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 PDCD1LG2Q9BQ51 273 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 MBNL3Q9NUK0 354 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 RBFOX1Q9NWB1 397 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GAGE2DQ9UEU5 116 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TPRKBQ9Y3C4 175 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 V9GYH0 126 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ATRXP46100 2492 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 COL27A1Q8IZC6 1860 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 A0A1B0GTL3 188 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM189A5PLL7 270 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF860A6NHJ4 632 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 A8MT66 165 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 H0YGG7 62 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SEMG1P04279 462 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SERPINE1P05121 402 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 CD2P06729 351 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 H1F0P07305 194 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ERGP11308 486 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 BCKDHAP12694 445 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 RCC1P18754 421 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SSR4P51571 173 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 EMP1P54849 157 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 HIST1H1AQ02539 215 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 EIF3IQ13347 325 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 LEG1Q6P5S2 330 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 C19orf48Q6RUI8 117 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TBPL2Q6SJ96 375 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZCCHC23Q6ZST2 131 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 C9orf139Q6ZV77 190 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRSS41Q7RTY9 318 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SERPINA11Q86U17 422 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 CHST4Q8NCG5 386 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 THAP6Q8TBB0 222 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ASB13Q8WXK3 278 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 FGF11Q92914 225 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 EEF1AKMT3Q96AZ1 226 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 DDIT4LQ96D03 193 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 CMBLQ96DG6 245 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 MS4A4EQ96PG1 132 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPER1Q99527 375 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 LINC00470Q9BZP3 86 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 RBKSQ9H477 322 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF222Q9UK12 451 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 NTNG1Q9Y2I2 539 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 FIS1Q9Y3D6 152 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 INMT-MINDY4F8WBC2 141 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 CRXO43186 299 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 EEDO75530 441 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TOXO94900 526 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 HLA-DQB1P01920 261 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ELANEP08246 267 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TACSTD2P09758 323 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 VSIG8P0DPA2 414 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 MYOD1P15172 320 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 GATA3P23771 443 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 LOXP28300 417 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 CSRP3P50461 194 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 GINS1Q14691 196 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF79Q15937 498 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC25A35Q3KQZ1 300 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ATP1A1-AS1Q5TC04 95 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR5R1Q8NH85 324 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 MRPL57Q9BQC6 102 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 HSPB9Q9BQS6 159 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 NIPSNAP3BQ9BS92 247 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 NRN1Q9NPD7 142 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ERG28Q9UKR5 140 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 HDGFL3Q9Y3E1 203 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 CACNA1BQ00975 2339 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 CFAP46Q8IYW2 2715 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM178BH3BS89 294 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 RHODO00212 210 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 NME4O00746 187 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRRG2O14669 202 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 PLA2G10O15496 165 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TBX6O95947 436 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 FABP3P05413 133 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF14P17017 642 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 AMTP48728 403 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 UNC119Q13432 240 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC10A1Q14973 349 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 DEFB134Q4QY38 66 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms