RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	COQ3	Q9NZJ6	369 aa		13.42	□□□□□ -0.26
CLDND1-222	ENST00000510545	FBXL17	Q9UF56	701 aa		13.42	□□□□□ -0.26
CLDND1-222	ENST00000510545	ARFGEF3	Q5TH69	2177 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545		B8ZZF3	427 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	CD3E	P07766	207 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	IRF2	P14316	349 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	EPHA1	P21709	976 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	BTNL3	Q6UXE8	466 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	C14orf79	Q96F83	325 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	REG4	Q9BYZ8	158 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	PLEKHF2	Q9H8W4	249 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	SAP30L	Q9HAJ7	183 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	PLEKHA2	Q9HB19	425 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	PSG11	Q9UQ72	335 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	DSCAML1	Q8TD84	2053 aa		13.41	□□□□□ -0.26
CLDND1-222	ENST00000510545	RAMP3	O60896	148 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	PITX3	O75364	302 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	MUC1	P15941	1255 aa	Predicted RBP	13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	LOXL3	P58215	753 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	BRWD1-AS2	P59051	145 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	ID3	Q02535	119 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	TCF23	Q7RTU1	214 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	PDZD9	Q8IXQ8	264 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	ZFP57	Q9NU63	452 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	LIN7C	Q9NUP9	197 aa	Known RBP	13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	NDRG3	Q9UGV2	375 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	IGHV3-7	P01780	117 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	P2RY1	P47900	373 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	C17orf58	Q2M2W7	97 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	OR2B11	Q5JQS5	317 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	ZBTB34	Q8NCN2	500 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	TMED6	Q8WW62	240 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	ZNF665	Q9H7R5	613 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	SDHAF2	Q9NX18	166 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	CALY	Q9NYX4	217 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	LRBA	P50851	2863 aa		13.4	□□□□□ -0.26
CLDND1-222	ENST00000510545	VSTM5	A8MXK1	200 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	F2RL2	O00254	374 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	SSSCA1	O60232	199 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	TMEM50A	O95807	157 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	MORN2	Q502X0	79 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	BARX1	Q9HBU1	254 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	WFDC1	Q9HC57	220 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	GNG12	Q9UBI6	72 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	ABCA4	P78363	2273 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	TAAR5	O14804	337 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	SIGLEC5	O15389	551 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	GPR137B	O60478	399 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	PROP1	O75360	226 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	APOBEC3A	P31941	199 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZNF134	P52741	427 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	NHLH2	Q02577	135 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	CA5BP1	Q8WTZ4	195 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	CCL17	Q92583	94 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	EGLN1	Q9GZT9	426 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	NCOR1P1	Q9H4R4	102 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	MED9	Q9NWA0	146 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	OR6C3	Q9NZP0	311 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	JPT1	Q9UK76	154 aa		13.39	□□□□□ -0.27
CLDND1-222	ENST00000510545	MED19	A0JLT2	244 aa	Predicted RBP	13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	MFSD2B	A6NFX1	497 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	FAM24A	A6NFZ4	105 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	LRRC30	A6NM36	301 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	LINC00473	A8K010	186 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	C17orf98	A8MV24	154 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	TMEM178B	H3BS89	294 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	FCN3	O75636	299 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	LPAR6	P43657	344 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545		Q3ZCU0	254 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	LSM10	Q969L4	123 aa	Known RBP	13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	DYNLRB1	Q9NP97	96 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	CISD1	Q9NZ45	108 aa	Known RBP	13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	CACNG5	Q9UF02	275 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	RNF115	Q9Y4L5	304 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545	HIVEP3	Q5T1R4	2406 aa		13.38	□□□□□ -0.27
CLDND1-222	ENST00000510545		A0A1B0GU03	582 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	RNF212B	A8MTL3	300 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	LGALS8	O00214	317 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	TMPRSS2	O15393	492 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	SFTPC	P11686	197 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	AKR1C2	P52895	323 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	EFNB3	Q15768	340 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	GPR157	Q5UAW9	335 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	ODF3L1	Q8IXM7	274 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	FAM234A	Q9H0X4	552 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	TMEM106B	Q9NUM4	274 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	IGSF23	A1L1A6	192 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	CHST1	O43916	411 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	YPEL1	O60688	119 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	SLC25A6	P12236	298 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	LOX	P28300	417 aa	Predicted RBP	13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	TFF3	Q07654	80 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	MSMO1	Q15800	293 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZNF295-AS1	Q8N0V1	137 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	OR2C3	Q8N628	320 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	RNASE11	Q8TAA1	199 aa	Known RBP	13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	LEAP2	Q969E1	77 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms