RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 DEFB108BQ8NET1 73 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 CTDSP1Q9GZU7 261 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 ARGFXA6NJG6 315 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 IGHEP01854 428 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 THBS3P49746 956 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 STARD6P59095 220 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 CEACAM21Q3KPI0 293 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 LYPD6Q86Y78 171 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 DLL3Q9NYJ7 618 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 DENND4AQ7Z401 1863 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 DUXBA0A1W2PPF3 345 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 LYZL6O75951 148 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 DEFA4P12838 97 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 UCP1P25874 307 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 COL10A1Q03692 680 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 FGFRL1Q8N441 504 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 OR5A2Q8NGI9 324 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 M0R1X1 148 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 IGLV3-19P01714 112 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 AESQ08117 197 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 OR1C1Q15619 314 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 CPEB3Q8NE35 698 aaKnown RBP12.72□□□□□ -0.37
USP38-202ENST00000510377 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 PARLQ9H300 379 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 TMEM30CPA0ZSE6 113 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 PMCHP20382 165 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 IL17BQ9UHF5 180 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 OR7C2O60412 319 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 RHBDL1O75783 438 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
USP38-202ENST00000510377 IL15RAQ13261 267 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 CIB3Q96Q77 187 aaPredicted RBP12.72□□□□□ -0.37
USP38-202ENST00000510377 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
USP38-202ENST00000510377 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 KIAA1324LA8MWY0 1029 aaPredicted RBP12.71□□□□□ -0.37
USP38-202ENST00000510377 NDUFB4O95168 129 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 COX6A1P12074 109 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 ZNF25P17030 456 aaPredicted RBP12.71□□□□□ -0.37
USP38-202ENST00000510377 CTSSP25774 331 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 TCL1AP56279 114 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 SERF2P84101 59 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 FADS6Q8N9I5 356 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 OR52L2PQ8NGH6 319 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 RAB24Q969Q5 203 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 CISD1Q9NZ45 108 aaKnown RBP12.71□□□□□ -0.37
USP38-202ENST00000510377 TRAV38-1A0A0B4J264 116 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 OR5B21A6NL26 309 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 ERVFC1-1P60608 527 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 SLC10A1Q14973 349 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 OR4X1Q8NH49 305 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 ABHD14BQ96IU4 210 aa12.71□□□□□ -0.37
USP38-202ENST00000510377 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.38
USP38-202ENST00000510377 CD46P15529 392 aa12.71□□□□□ -0.38
USP38-202ENST00000510377 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.38
USP38-202ENST00000510377 ELOVL1Q9BW60 279 aa12.71□□□□□ -0.38
USP38-202ENST00000510377 TCFL5Q9UL49 500 aa12.71□□□□□ -0.38
USP38-202ENST00000510377 CCL11P51671 97 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 HIST3H2BBQ8N257 126 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
USP38-202ENST00000510377 OR1L1Q8NH94 360 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 OR2J1Q9GZK6 312 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 CD55P08174 381 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 C21orf62-AS1Q17RA5 79 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 FCN1O00602 326 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 NDUFB7P17568 137 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 FOXG1P55316 489 aaPredicted RBP12.7□□□□□ -0.38
USP38-202ENST00000510377 SIGLECL1Q8N7X8 197 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 TBX15Q96SF7 602 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 MPC1Q9Y5U8 109 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 ZNF318Q5VUA4 2279 aa12.7□□□□□ -0.38
USP38-202ENST00000510377 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 ZG16O60844 167 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 TMEM50AO95807 157 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 HRASP01112 189 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 SLC35B1P78383 322 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 ID3Q02535 119 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 DPPA3Q6W0C5 159 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 LRTM2Q8N967 370 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 GATAD1Q8WUU5 269 aa12.69□□□□□ -0.38
USP38-202ENST00000510377 TMEM56Q96MV1 263 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms