RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OR2H1Q9GZK4 316 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 TAF9BQ9HBM6 251 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 SCN9AQ15858 1988 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 MYH11P35749 1972 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 LOC102725191A0A1B0GVB3 256 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 MSGN1A6NI15 193 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF705EA8MWA4 302 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 TYROBPO43914 113 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 AMBPP02760 352 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 CNTFRP26992 372 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 MYCNOSP40205 109 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 CDK6Q00534 326 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC10A1Q14973 349 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 JOSD1Q15040 202 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF506Q5JVG8 444 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 IBA57Q5T440 356 aaKnown RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 Q6ZN92 141 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 RFESDQ8TAC1 157 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 ATOH8Q96SQ7 321 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC25A33Q9BSK2 321 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 PRTFDC1Q9NRG1 225 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 KCNIP1Q9NZI2 227 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF646O15015 1829 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 RGPD3A6NKT7 1758 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 RGPD4Q7Z3J3 1758 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 MTCL1Q9Y4B5 1905 aaKnown RBP6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 TRBV5-3A0A0A0MS03 114 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 TRAV38-1A0A0B4J264 116 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 I3L4J1 428 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 SERPINE1P05121 402 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 FAAP20Q6NZ36 180 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 FAM57BQ71RH2 274 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 OR1L3Q8NH93 324 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 KLK6Q92876 244 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 THTPAQ9BU02 230 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 OR2J1Q9GZK6 312 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 C20orf85Q9H1P6 137 aa6.05□□□□□ -1.44
PDGFRA-206ENST00000508170 COL2A1P02458 1487 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 RBBP6Q7Z6E9 1792 aaKnown RBP6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 LOXHD1Q8IVV2 1947 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 SLX4Q8IY92 1834 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 AIFM1O95831 613 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 IGHMP01871 453 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 CD55P08174 381 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 CA6P23280 308 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 GPR6P46095 362 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC18A1P54219 525 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 DEFA3P59666 94 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 NHLRC3Q5JS37 347 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 CNIH2Q6PI25 160 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 MRGPREQ86SM8 312 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM229BQ8NBD8 167 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM174Q8WUU8 243 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 RITA1Q96K30 269 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 SSBP3Q9BWW4 388 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 C1QTNF4Q9BXJ3 329 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC29A3Q9BZD2 475 aa6.04□□□□□ -1.44
PDGFRA-206ENST00000508170 TRAF3IP2O43734 574 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 NDUFC2O95298 119 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 AQP4P55087 323 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 PSG9Q00887 426 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RHEBQ15382 184 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 MESTQ5EB52 335 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 ARPINQ7Z6K5 226 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RBM23Q86U06 439 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 CIARTQ8N365 385 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF615Q8N8J6 731 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 OR8B12Q8NGG6 310 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 OR2G3Q8NGZ4 309 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 OR10G6Q8NH81 332 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 LMO3Q8TAP4 145 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RNF166Q96A37 237 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 LRRC61Q9BV99 259 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF331Q9NQX6 463 aaPredicted RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM30AQ9NV96 361 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TBX21Q9UL17 535 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RBMY1BA6NDE4 496 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RBMY1EA6NEQ0 496 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 EIF4EP06730 217 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RBMY1DP0C7P1 496 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RBMY1A1P0DJD3 496 aaKnown RBP6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 BRS3P32247 399 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 DRD3P35462 400 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 CACNG7P62955 275 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TIMM50Q3ZCQ8 353 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RASL11AQ6T310 242 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 C20orf196Q8IYI0 205 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 RDH12Q96NR8 316 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 NRTNQ99748 197 aa6.03□□□□□ -1.44
PDGFRA-206ENST00000508170 CHST6Q9GZX3 395 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms