RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 LTBRP36941 435 aa15.03■□□□□ -0
NUP54-205ENST00000507257 SLC25A22Q9H936 323 aa15.03■□□□□ -0
NUP54-205ENST00000507257 MARCH11A6NNE9 402 aa15.02■□□□□ -0
NUP54-205ENST00000507257 ESDP10768 282 aa15.02■□□□□ -0
NUP54-205ENST00000507257 LINC01551Q86U37 167 aa15.02■□□□□ -0
NUP54-205ENST00000507257 WNT16Q9UBV4 365 aa15.02■□□□□ -0
NUP54-205ENST00000507257 TRAPPC1Q9Y5R8 145 aa15.02■□□□□ -0
NUP54-205ENST00000507257 PMS2P5A8MQ11 134 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 HSPB6O14558 160 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 DLEU1O43261 78 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 PDGFBP01127 241 aaPredicted RBP15.02□□□□□ -0.01
NUP54-205ENST00000507257 LINC00614P0C842 121 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 YPEL3P61236 119 aaPredicted RBP15.02□□□□□ -0.01
NUP54-205ENST00000507257 MRPL21Q7Z2W9 205 aaKnown RBP15.02□□□□□ -0.01
NUP54-205ENST00000507257 ZCCHC14Q8WYQ9 949 aaKnown RBP15.02□□□□□ -0.01
NUP54-205ENST00000507257 APOBEC3DQ96AK3 386 aaPredicted RBP15.02□□□□□ -0.01
NUP54-205ENST00000507257 MS4A10Q96PG2 267 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 TXNDC17Q9BRA2 123 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 DLL3Q9NYJ7 618 aa15.02□□□□□ -0.01
NUP54-205ENST00000507257 OR5B21A6NL26 309 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 RPLP1P05386 114 aaKnown RBP15.01□□□□□ -0.01
NUP54-205ENST00000507257 P0C879 139 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 SOX8P57073 446 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 SELENOTP62341 195 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 PAFAH1B2P68402 229 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 MSMO1Q15800 293 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 RAB1CQ92928 201 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 LINC00470Q9BZP3 86 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 PKIBQ9C010 78 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 OR1A1Q9P1Q5 309 aa15.01□□□□□ -0.01
NUP54-205ENST00000507257 TRAV9-1A0A075B6T8 112 aa15□□□□□ -0.01
NUP54-205ENST00000507257 IGHV5-10-1A0A0J9YXX1 117 aa15□□□□□ -0.01
NUP54-205ENST00000507257 YPEL1O60688 119 aa15□□□□□ -0.01
NUP54-205ENST00000507257 LILRA1O75019 489 aa15□□□□□ -0.01
NUP54-205ENST00000507257 CLDN1O95832 211 aa15□□□□□ -0.01
NUP54-205ENST00000507257 CELA2AP08217 269 aa15□□□□□ -0.01
NUP54-205ENST00000507257 COX6A1P12074 109 aa15□□□□□ -0.01
NUP54-205ENST00000507257 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
NUP54-205ENST00000507257 RANP62826 216 aaKnown RBP15□□□□□ -0.01
NUP54-205ENST00000507257 FFAR4Q5NUL3 377 aa15□□□□□ -0.01
NUP54-205ENST00000507257 FGFRL1Q8N441 504 aa15□□□□□ -0.01
NUP54-205ENST00000507257 ZBTB34Q8NCN2 500 aa15□□□□□ -0.01
NUP54-205ENST00000507257 SGCZQ96LD1 299 aa15□□□□□ -0.01
NUP54-205ENST00000507257 YPEL2Q96QA6 119 aa15□□□□□ -0.01
NUP54-205ENST00000507257 CRIM1Q9NZV1 1036 aa15□□□□□ -0.01
NUP54-205ENST00000507257 C11orf94C9JXX5 98 aa15□□□□□ -0.01
NUP54-205ENST00000507257 F6UZH7 168 aa15□□□□□ -0.01
NUP54-205ENST00000507257 HS3ST1O14792 307 aa15□□□□□ -0.01
NUP54-205ENST00000507257 SYNGR1O43759 233 aa15□□□□□ -0.01
NUP54-205ENST00000507257 CXCL13O43927 109 aa15□□□□□ -0.01
NUP54-205ENST00000507257 PAGE4O60829 102 aa15□□□□□ -0.01
NUP54-205ENST00000507257 TNFSF13O75888 250 aa15□□□□□ -0.01
NUP54-205ENST00000507257 SYNGR4O95473 234 aa15□□□□□ -0.01
NUP54-205ENST00000507257 NPPCP23582 126 aa15□□□□□ -0.01
NUP54-205ENST00000507257 G0S2P27469 103 aa15□□□□□ -0.01
NUP54-205ENST00000507257 EPHA8P29322 1005 aaPredicted RBP15□□□□□ -0.01
NUP54-205ENST00000507257 OR3A1P47881 315 aa15□□□□□ -0.01
NUP54-205ENST00000507257 MLF1P58340 268 aa15□□□□□ -0.01
NUP54-205ENST00000507257 FAM78BQ5VT40 261 aa15□□□□□ -0.01
NUP54-205ENST00000507257 OR8G2PQ6IF36 304 aa15□□□□□ -0.01
NUP54-205ENST00000507257 FAM180AQ6UWF9 173 aa15□□□□□ -0.01
NUP54-205ENST00000507257 TEX43Q6ZNM6 134 aa15□□□□□ -0.01
NUP54-205ENST00000507257 FAM58AQ8N1B3 248 aa15□□□□□ -0.01
NUP54-205ENST00000507257 OR5P3Q8WZ94 311 aa15□□□□□ -0.01
NUP54-205ENST00000507257 MRPS18CQ9Y3D5 142 aaKnown RBP15□□□□□ -0.01
NUP54-205ENST00000507257 A0A0U1RQK1 487 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 ZNF320A2RRD8 509 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 HPRT1P00492 218 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 CLEC12BQ2HXU8 276 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 OR1K1Q8NGR3 316 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 GATAD1Q8WUU5 269 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 CIB3Q96Q77 187 aaPredicted RBP14.99□□□□□ -0.01
NUP54-205ENST00000507257 MIEN1Q9BRT3 115 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 TMEM208Q9BTX3 173 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 KCNIP2Q9NS61 270 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 PPP1R3CQ9UQK1 317 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 GOLT1BQ9Y3E0 138 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 MPC1Q9Y5U8 109 aa14.99□□□□□ -0.01
NUP54-205ENST00000507257 C17orf112F2Z3M2 114 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 TNFSF10P50591 281 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 RAB30Q15771 203 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 PRSS8Q16651 343 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 RPS19BP1Q86WX3 136 aaKnown RBP14.98□□□□□ -0.01
NUP54-205ENST00000507257 ZNF709Q8N972 641 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 OR10D3Q8NH80 312 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 RDH5Q92781 318 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 GMPPAQ96IJ6 420 aaPredicted RBP14.98□□□□□ -0.01
NUP54-205ENST00000507257 TBX15Q96SF7 602 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 NPCDR1Q9BY65 106 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 TMEM106BQ9NUM4 274 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 ELOVL5Q9NYP7 299 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 A0A1W2PQM1 296 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 CHRNA7P36544 502 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 GNG3P63215 75 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 Q6P435 159 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 ZNF497Q6ZNH5 498 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 NUFIP2Q7Z417 695 aaKnown RBP14.98□□□□□ -0.01
NUP54-205ENST00000507257 DRAM1Q8N682 238 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 OR10P1Q8NGE3 313 aa14.98□□□□□ -0.01
NUP54-205ENST00000507257 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms