RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 STEAP3Q658P3 488 aa20.09■□□□□ 0.81
PVT1-201ENST00000504719 SLC25A38Q96DW6 304 aa20.09■□□□□ 0.81
PVT1-201ENST00000504719 EAF1Q96JC9 268 aaPredicted RBP20.09■□□□□ 0.81
PVT1-201ENST00000504719 YPEL2Q96QA6 119 aa20.09■□□□□ 0.81
PVT1-201ENST00000504719 NAA50Q9GZZ1 169 aaKnown RBP20.09■□□□□ 0.81
PVT1-201ENST00000504719 ELF5Q9UKW6 265 aaPredicted RBP20.09■□□□□ 0.81
PVT1-201ENST00000504719 TSSC4Q9Y5U2 329 aaPredicted RBP20.09■□□□□ 0.81
PVT1-201ENST00000504719 A0A1W2PRX2 142 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 TCRBV4S1A1TA0A5B7 111 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 FCGR3AP08637 254 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 SCTP09683 121 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 CD1BP29016 333 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 ALDH3B2P48448 385 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 ARL6IP1Q15041 203 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 BEAN1Q3B7T3 259 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 ANKRD13BQ86YJ7 626 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 Q8N6K4 173 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 OR4X2Q8NGF9 303 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 ABHD14AQ9BUJ0 271 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 SPATA2Q9UM82 520 aa20.08■□□□□ 0.81
PVT1-201ENST00000504719 TRDCB7Z8K6 153 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 GPR107Q5VW38 600 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 GPR141Q7Z602 305 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 OR2T10Q8NGZ9 312 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 SLC25A46Q96AG3 418 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.07■□□□□ 0.8
PVT1-201ENST00000504719 SLC23A1Q9UHI7 598 aa20.07■□□□□ 0.8
PVT1-201ENST00000504719 ZNF230Q9UIE0 474 aaPredicted RBP20.07■□□□□ 0.8
PVT1-201ENST00000504719 PRKDCP78527 4128 aaKnown RBP20.06■□□□□ 0.8
PVT1-201ENST00000504719 TXNL1O43396 289 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 TALDO1P37837 337 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 LY6G6FQ5SQ64 297 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 KPRPQ5T749 579 aaPredicted RBP20.06■□□□□ 0.8
PVT1-201ENST00000504719 TGIF2LXQ8IUE1 241 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 OR2AK2Q8NG84 335 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 MAFIPQ8WZ33 124 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 PHF21AQ96BD5 680 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 OR1A1Q9P1Q5 309 aa20.06■□□□□ 0.8
PVT1-201ENST00000504719 PSMB11A5LHX3 300 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 GABARAPO95166 117 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 IGHG2P01859 326 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 ZBTB25P24278 435 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 CTF1Q16619 201 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 HACD4Q5VWC8 232 aa20.05■□□□□ 0.8
PVT1-201ENST00000504719 IGKV1-6A0A0C4DH72 117 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 TMEM235A6NFC5 223 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 ZNF736B4DX44 427 aaPredicted RBP20.04■□□□□ 0.8
PVT1-201ENST00000504719 HSPA12AO43301 675 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 MOSP00540 346 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 GSTP1P09211 210 aaKnown RBP20.04■□□□□ 0.8
PVT1-201ENST00000504719 CEACAM6P40199 344 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 ZNF260Q3ZCT1 412 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 Q8N9W7 124 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 CHPT1Q8WUD6 406 aa20.04■□□□□ 0.8
PVT1-201ENST00000504719 NOL4LQ96MY1 436 aaPredicted RBP20.04■□□□□ 0.8
PVT1-201ENST00000504719 PARP12Q9H0J9 701 aaKnown RBP20.04■□□□□ 0.8
PVT1-201ENST00000504719 NCBP2LA6PVI3 153 aaKnown RBP20.03■□□□□ 0.8
PVT1-201ENST00000504719 FABP7O15540 132 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 LANCL1O43813 399 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 PF4V1P10720 104 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 KIR2DS1Q14954 304 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 SLC35E3Q7Z769 313 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 ODF3L1Q8IXM7 274 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 OR4A4PQ8NGN8 299 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 PLSCR3Q9NRY6 295 aa20.03■□□□□ 0.8
PVT1-201ENST00000504719 NOTCH3Q9UM47 2321 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 TRAV18A0A075B6X5 111 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 ST8SIA5O15466 376 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 GSTT2P0CG29 244 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 GSTT2BP0CG30 244 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 OXLD1Q5BKU9 147 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 ZNF329Q86UD4 541 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 WFDC9Q8NEX5 89 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 NUDCD2Q8WVJ2 157 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 IFI27L2Q9H2X8 130 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 DIABLOQ9NR28 239 aa20.02■□□□□ 0.8
PVT1-201ENST00000504719 LIN7CQ9NUP9 197 aaKnown RBP20.02■□□□□ 0.8
PVT1-201ENST00000504719 A0A0A6YYH2 397 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 A6NJ64 397 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 DTYMKP23919 212 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 OR3A3P47888 321 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 GNG2P59768 71 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 SRSF7Q16629 238 aaKnown RBP eCLIP20.01■□□□□ 0.793e-10■■■■■ 33.8
PVT1-201ENST00000504719 IGSF11Q5DX21 431 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 UBE2NLQ5JXB2 153 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 SAMD12Q8N8I0 201 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 KCTD12Q96CX2 325 aaKnown RBP20.01■□□□□ 0.79
PVT1-201ENST00000504719 ABCG5Q9H222 651 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 LINC00527Q9UJ94 153 aa20.01■□□□□ 0.79
PVT1-201ENST00000504719 SAA2-SAA4A0A096LPE2 208 aa20■□□□□ 0.79
PVT1-201ENST00000504719 LINC01548A6NM66 108 aa20■□□□□ 0.79
PVT1-201ENST00000504719 BET1O15155 118 aa20■□□□□ 0.79
PVT1-201ENST00000504719 SAA2P0DJI9 122 aaPredicted RBP20■□□□□ 0.79
PVT1-201ENST00000504719 PITPNAQ00169 270 aa20■□□□□ 0.79
PVT1-201ENST00000504719 LSAMPQ13449 338 aa20■□□□□ 0.79
PVT1-201ENST00000504719 PNLIPRP3Q17RR3 467 aa20■□□□□ 0.79
PVT1-201ENST00000504719 KHDC1LQ5JSQ8 128 aa20■□□□□ 0.79
PVT1-201ENST00000504719 FOXRED2Q8IWF2 684 aa20■□□□□ 0.79
PVT1-201ENST00000504719 OR8H1Q8NGG4 311 aa20■□□□□ 0.79
PVT1-201ENST00000504719 EDARADDQ8WWZ3 215 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms