RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ONECUT1Q9UBC0 465 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GZMBP10144 247 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 MMDQ15546 238 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 Q56UQ5 140 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 FAM173AQ9BQD7 235 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TRPM6Q9BX84 2022 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 PGFP49763 221 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GNG3P63215 75 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF658BQ4V348 819 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 PRR18Q8N4B5 295 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 SGK494Q96LW2 274 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 CD84Q9UIB8 345 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 POU2F2P09086 479 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 MAJINQ3KP22 176 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 SLC25A48Q6ZT89 311 aaKnown RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 C22orf46C9J442 243 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 EML2O95834 649 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 ACP1P24666 158 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 MOGAT3Q86VF5 341 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM116Q8NCL8 245 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM160Q9NX00 188 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 FCER1GP30273 86 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 Q6ZVL8 140 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 MRPL38Q96DV4 380 aaKnown RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TICRRQ7Z2Z1 1910 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 CD52P31358 61 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 CDKN3Q16667 212 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 OR14C36Q8NHC7 312 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 Q8WTZ3 238 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TAF15Q92804 592 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 NAT6Q93015 286 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 PIMREGQ9BSJ6 248 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 GPR27Q9NS67 375 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 GYPBP06028 91 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 PDE6HQ13956 83 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TM4SF20Q53R12 229 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 WDR38Q5JTN6 314 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 Q6ZS49 121 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 PFN4Q8NHR9 129 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 PPDPFLQ8WWR9 84 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 GPR146Q96CH1 333 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 RBM24Q9BX46 236 aaKnown RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 VN1R1Q9GZP7 353 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 GON4LQ3T8J9 2241 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TIAL1Q01085 375 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 RNF115Q9Y4L5 304 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 R4GN57 208 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 XIRP1Q702N8 1843 aaKnown RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 OR4C46A6NHA9 309 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 FCN3O75636 299 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TNFRSF4P43489 277 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 IER3P46695 156 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 ASPHD2Q6ICH7 369 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 Q6ZS92 163 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 MRAPQ8TCY5 172 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 DNASE2BQ8WZ79 361 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 DHCR7Q9UBM7 475 aaKnown RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 SAA2-SAA4A0A096LPE2 208 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 M0QZ24 198 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 C8orf89P0DMQ9 161 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 CASP6P55212 293 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM50BP56557 158 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 NEGR1Q7Z3B1 354 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 SAMD7Q7Z3H4 446 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 OR2T6Q8NHC8 308 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF668Q96K58 619 aaPredicted RBP5.3□□□□□ -1.56
LINC02397-201ENST00000504409 HS3ST3B1Q9Y662 390 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 IL18BPO95998 194 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 COX5BP10606 129 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 PRSS8Q16651 343 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 CLLU1OSQ5K130 101 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 ASB10Q8WXI3 467 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 CACNG8Q8WXS5 425 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 SIGLEC12Q96PQ1 595 aa5.3□□□□□ -1.56
LINC02397-201ENST00000504409 DOCK6Q96HP0 2047 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 ACRP10323 421 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 ARG2P78540 354 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 SAMD5Q5TGI4 173 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF880Q6PDB4 577 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 CALHM1Q8IU99 346 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 MENTQ9BUN1 341 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 WNT6Q9Y6F9 365 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 ALPK3Q96L96 1907 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 A0A0G2JLM5 398 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 FITM1A5D6W6 292 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 AMBPP02760 352 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 RNPS1Q15287 305 aaKnown RBP5.29□□□□□ -1.56
LINC02397-201ENST00000504409 OR4X1Q8NH49 305 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 NRSN2Q9GZP1 204 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
LINC02397-201ENST00000504409 DNAJB12Q9NXW2 375 aaKnown RBP5.29□□□□□ -1.56
LINC02397-201ENST00000504409 CLDN14O95500 239 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 SNAI1O95863 264 aaPredicted RBP5.29□□□□□ -1.56
LINC02397-201ENST00000504409 CRYBB3P26998 211 aa5.29□□□□□ -1.56
LINC02397-201ENST00000504409 RAB1BQ9H0U4 201 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms