RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 MCRIP1C9JLW8 97 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 OGG1O15527 345 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 NDUFA3O95167 84 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 CD2P06729 351 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 OR3A3P47888 321 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 PPP3R1P63098 170 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 PITPNAQ00169 270 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 MED22Q15528 200 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 RAB12Q6IQ22 244 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 TSPAN14Q8NG11 270 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 NPBQ8NG41 125 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 ACOT13Q9NPJ3 140 aa12.34□□□□□ -0.43
MUC1-220ENST00000498431 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
MUC1-220ENST00000498431 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
MUC1-220ENST00000498431 A0A087WXM4 84 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
MUC1-220ENST00000498431 LALBAP00709 142 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 EGR2P11161 476 aaPredicted RBP12.33□□□□□ -0.44
MUC1-220ENST00000498431 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
MUC1-220ENST00000498431 VEGFCP49767 419 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
MUC1-220ENST00000498431 ZNF367Q7RTV3 350 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 FCGR1BQ92637 280 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 OR4C12Q96R67 309 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.44
MUC1-220ENST00000498431 TRAV8-7A0A075B6U6 113 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 A8MZ25 164 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 FCN1O00602 326 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
MUC1-220ENST00000498431 CX3CL1P78423 397 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
MUC1-220ENST00000498431 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 CST11Q9H112 138 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 BANF2Q9H503 90 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 GAB2Q9UQC2 676 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 NUBP2Q9Y5Y2 271 aa12.32□□□□□ -0.44
MUC1-220ENST00000498431 SAA2-SAA4A0A096LPE2 208 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 HSPA12AO43301 675 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 SC5DO75845 299 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 HSPB1P04792 205 aaKnown RBP12.31□□□□□ -0.44
MUC1-220ENST00000498431 CD1AP06126 327 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 HSMCR30P0CW71 290 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
MUC1-220ENST00000498431 CELP19835 753 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 MLLT11Q13015 90 aaPredicted RBP12.31□□□□□ -0.44
MUC1-220ENST00000498431 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 TRAT1Q6PIZ9 186 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 MUL1Q969V5 352 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 SMIM19Q96E16 107 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 MS4A10Q96PG2 267 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 MGLLQ99685 303 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 FAM103A1Q9BTL3 118 aaKnown RBP12.31□□□□□ -0.44
MUC1-220ENST00000498431 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
MUC1-220ENST00000498431 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 TNCP24821 2201 aa12.31□□□□□ -0.44
MUC1-220ENST00000498431 HAGHQ16775 308 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
MUC1-220ENST00000498431 GLIPR1L1Q6UWM5 242 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
MUC1-220ENST00000498431 GHSRQ92847 366 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 UFD1Q92890 307 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 JPT1Q9UK76 154 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 STUB1Q9UNE7 303 aa12.3□□□□□ -0.44
MUC1-220ENST00000498431 TRBV5-5A0A0J9YX44 114 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 PNMA8CA0A1B0GUJ8 204 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 RRHO14718 337 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 YPEL1O60688 119 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 MAS1P04201 325 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 ARSBP15848 533 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 TPBGQ13641 420 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 GPR176Q14439 515 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 CD200R1LQ6Q8B3 271 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 SGPP2Q8IWX5 399 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 FLYWCH2Q96CP2 140 aaKnown RBP12.29□□□□□ -0.44
MUC1-220ENST00000498431 MRPS24Q96EL2 167 aaKnown RBP12.29□□□□□ -0.44
MUC1-220ENST00000498431 RHOVQ96L33 236 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 SPATA25Q9BR10 227 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 SELENOIQ9C0D9 397 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 IFI27L2Q9H2X8 130 aa12.29□□□□□ -0.44
MUC1-220ENST00000498431 CA11O75493 328 aa12.28□□□□□ -0.44
MUC1-220ENST00000498431 GPX5O75715 221 aa12.28□□□□□ -0.44
MUC1-220ENST00000498431 MGMTP16455 207 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms