RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 M0QYV0 167 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 GYG2O15488 501 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 MMP23AO75900 390 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 OR4Q2P0C623 313 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 SMIM10L2AP0DMW4 78 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 SMIM10L2BP0DMW5 78 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 IL3RAP26951 378 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 HPCAP84074 193 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 IRF4Q15306 451 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 ACOT6Q3I5F7 207 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-224ENST00000497488 CENPWQ5EE01 88 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 TCTEX1D4Q5JR98 221 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 OTPQ5XKR4 325 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 OLIG3Q7RTU3 272 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 DEFB128Q7Z7B8 93 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF525Q8N782 197 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 OR1J4Q8NGS1 313 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 OR4X1Q8NH49 305 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 TNFAIP8L1Q8WVP5 186 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 RASSF5Q8WWW0 418 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 DEFB126Q9BYW3 111 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 NMNAT1Q9HAN9 279 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-224ENST00000497488 IGKV6D-21A0A0A0MT36 114 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 IGHV2-26A0A0B4J1V2 119 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 EPOPA6NHQ4 379 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 D6RAR5 112 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 SLC37A4O43826 429 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 CD5LO43866 347 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF432O94892 652 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR2A4O95047 310 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 IGLV2-8P01709 118 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 HMGN1P05114 100 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR4A8P0C604 315 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR5G3P0C626 314 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 GABRR1P24046 479 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR1E2P47887 323 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 GZMMP51124 257 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 DAD1P61803 113 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 HIST1H3AP68431 136 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 H3F3AP84243 136 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 TFAMQ00059 246 aaKnown RBP4.36□□□□□ -1.71
BRCA1-224ENST00000497488 PSG4Q00888 419 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 KIAA0040Q15053 153 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM183BQ1AE95 376 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 ZCWPW2Q504Y3 356 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 N4BP2L1Q5TBK1 243 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-224ENST00000497488 FAM222AQ5U5X8 452 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 GLYATQ6IB77 296 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 GSG1LQ6UXU4 331 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 HIST2H3AQ71DI3 136 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 VN1R4Q7Z5H5 301 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM144Q7Z5S9 345 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 CALHM3Q86XJ0 350 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM183AQ8IXX5 376 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR4M2Q8NGB6 313 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR52P1PQ8NH57 321 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 DYDC1Q8WWB3 177 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 CEP170P1Q96L14 293 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR2A7Q96R45 310 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 OR52B2Q96RD2 323 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 DOK5Q9P104 306 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 CDH23Q9H251 3354 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 TANC1Q9C0D5 1861 aa4.36□□□□□ -1.71
BRCA1-224ENST00000497488 C2orf16Q68DN1 1984 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM150BA6NC51 233 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 CD300LBA8K4G0 201 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 KCNK2O95069 426 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 YIF1AO95070 293 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 CYB5R3P00387 301 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-224ENST00000497488 IFNA21P01568 189 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 HBZP02008 142 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 P0C879 139 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 ESDP10768 282 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 RPL5P46777 297 aaKnown RBP4.35□□□□□ -1.71
BRCA1-224ENST00000497488 MESTQ5EB52 335 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 UBE2NLQ5JXB2 153 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 PHF13Q86YI8 300 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-224ENST00000497488 CMSS1Q9BQ75 279 aaKnown RBP4.35□□□□□ -1.71
BRCA1-224ENST00000497488 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 TRIM4Q9C037 500 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 PLEKHF2Q9H8W4 249 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 POMPQ9Y244 141 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 CARHSP1Q9Y2V2 147 aaKnown RBP4.35□□□□□ -1.71
BRCA1-224ENST00000497488 COL6A3P12111 3177 aa4.35□□□□□ -1.71
BRCA1-224ENST00000497488 MYH7BA7E2Y1 1941 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 WI2-2373I1.2A0A1W2PRP0 233 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 K7EQS6 105 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 TCF21O43680 179 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 OR7C1O76099 320 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-224ENST00000497488 CD79AP11912 226 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 GTF2F2P13984 249 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 DDTP30046 118 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 ALDH3A1P30838 453 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 TAS2R41P59536 307 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 DEFB103AP81534 67 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 CDK5Q00535 292 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms