RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 HBMQ6B0K9 141 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC18B1Q6NT16 456 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FBXL22Q6P050 247 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TNFAIP8L2Q6P589 184 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A47Q6Q0C1 308 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SBSNQ6UWP8 590 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM231DQ6ZW35 169 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PGBD5Q8N414 524 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 DEFB125Q8N687 156 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TEX29Q8N6K0 151 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 WDR31Q8NA23 367 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 THAP8Q8NA92 274 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM229BQ8NBD8 167 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR52R1Q8NGF1 315 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5AK2Q8NH90 309 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC37A2Q8TED4 501 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SSMEM1Q8WWF3 244 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 DDIT4LQ96D03 193 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF681Q96N22 645 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4C12Q96R67 309 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 GABRG3Q99928 467 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 NIPSNAP3BQ9BS92 247 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PRADC1Q9BSG0 188 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FGFBP2Q9BYJ0 223 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 RNASE7Q9H1E1 156 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SH3BGRL3Q9H299 93 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PELI2Q9HAT8 420 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FGF20Q9NP95 211 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ACER3Q9NUN7 267 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 WDR83OSQ9Y284 106 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 BTRCQ9Y297 605 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 INSIG2Q9Y5U4 225 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 MICAL3Q7RTP6 2002 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FOCADQ5VW36 1801 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ATRNO75882 1429 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FXYD6-FXYD2A0A087WZ82 144 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TRAV24A0A0B4J272 114 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CEACAM18A8MTB9 384 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FNDC10F2Z333 226 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 H0YJW9 148 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 H3BTX0 84 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CDC42EP2O14613 210 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CRXO43186 299 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF354AO60765 605 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CLDN11O75508 207 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 DHRS3O75911 302 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 IGLC2P0DOY2 106 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 IGLC3P0DOY3 106 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 EPCAMP16422 314 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ARL2P36404 184 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 RBM11P57052 281 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 LCN6P62502 163 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TFF2Q03403 129 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 MYBPHQ13203 477 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF345Q14585 488 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SPHARQ15513 63 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PRR30Q53SZ7 412 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 MEIG1Q5JSS6 88 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2T5Q6IEZ7 315 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SPSB3Q6PJ21 355 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 EPGNQ6UW88 154 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZTK2 550 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC35F2Q8IXU6 374 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SAXO1Q8IYX7 474 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 COX18Q8N8Q8 333 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 NFAM1Q8NET5 270 aaPredicted RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2M3Q8NG83 312 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2T29Q8NH02 315 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PPTC7Q8NI37 304 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 JOSD2Q8TAC2 188 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 C8orf46Q8TAG6 207 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A40Q8TBP6 338 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 IMMP2LQ96T52 175 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 SOSTQ9BQB4 213 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM173AQ9BQD7 235 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 GGTLC1Q9BX51 225 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FXYD6Q9H0Q3 95 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CISD1Q9NZ45 108 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ASF1AQ9Y294 204 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 PAM16Q9Y3D7 125 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 R4GN57 208 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 HECW1Q76N89 1606 aa2.59□□□□□ -2
SNRNP48-202ENST00000496946 THSD7BQ9C0I4 1608 aa2.59□□□□□ -2
SNRNP48-202ENST00000496946 NFAT5O94916 1531 aa2.59□□□□□ -2
SNRNP48-202ENST00000496946 ATP7AQ04656 1500 aa2.59□□□□□ -2
SNRNP48-202ENST00000496946 NUP153P49790 1475 aaKnown RBP2.59□□□□□ -2
SNRNP48-202ENST00000496946 ZNF106Q9H2Y7 1883 aaKnown RBP2.59□□□□□ -2
SNRNP48-202ENST00000496946 RICTORQ6R327 1708 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TEX48A0A1B0GUV7 120 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 MEIS3P1A6NDR6 274 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TMEM202A6NGA9 273 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR2T8A6NH00 312 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 DDTLA6NHG4 134 aaPredicted RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 BBIP1A8MTZ0 92 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 H0YIZ8 118 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 M0R1X1 148 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 GEMIN2O14893 280 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms