RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 GCN1Q92616 2671 aaKnown RBP17.68■□□□□ 0.42
FGFR1-223ENST00000496296 CD55P08174 381 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 COMMD1Q8N668 190 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 GCSAMQ8N6F7 178 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 BOLLQ8N9W6 283 aaKnown RBP17.67■□□□□ 0.42
FGFR1-223ENST00000496296 TSNAXQ99598 290 aaKnown RBP17.67■□□□□ 0.42
FGFR1-223ENST00000496296 EGLN1Q9GZT9 426 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 GCM1Q9NP62 436 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 RNF7Q9UBF6 113 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 ARID1AO14497 2285 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 ZG16O60844 167 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 FBXO24O75426 580 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 IRF2P14316 349 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 ADCYAP1P18509 176 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 CEBPDP49716 269 aaPredicted RBP17.67■□□□□ 0.42
FGFR1-223ENST00000496296 NHLH2Q02577 135 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 MSMO1Q15800 293 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 SPRNQ5BIV9 151 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 CLRN3Q8NCR9 226 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 DYNLRB1Q9NP97 96 aa17.67■□□□□ 0.42
FGFR1-223ENST00000496296 IGSF23A1L1A6 192 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 CD5P06127 495 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 POLR2GP62487 172 aaKnown RBP eCLIP17.66■□□□□ 0.42
FGFR1-223ENST00000496296 BAXQ07812 192 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 CXorf66Q5JRM2 361 aaPredicted RBP17.66■□□□□ 0.42
FGFR1-223ENST00000496296 GPHA2Q96T91 129 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 SEC11CQ9BY50 192 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 HRH4Q9H3N8 390 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 MS4A5Q9H3V2 200 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 UQCC1Q9NVA1 299 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 CISD1Q9NZ45 108 aaKnown RBP17.66■□□□□ 0.42
FGFR1-223ENST00000496296 PPP1R3CQ9UQK1 317 aa17.66■□□□□ 0.42
FGFR1-223ENST00000496296 STRAPQ9Y3F4 350 aaKnown RBP17.66■□□□□ 0.42
FGFR1-223ENST00000496296 B9A039 149 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 PSPNO60542 156 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 LHBP01229 141 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 EGR1P18146 543 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 SRSF3P84103 164 aaKnown RBP17.65■□□□□ 0.42
FGFR1-223ENST00000496296 EFNB3Q15768 340 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 TMEM252Q8N6L7 170 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 ZBTB34Q8NCN2 500 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 Q8TCH9 128 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 ITLN2Q8WWU7 325 aaPredicted RBP17.65■□□□□ 0.42
FGFR1-223ENST00000496296 IL1F10Q8WWZ1 152 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 NEUROG1Q92886 237 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 KIAA1324LA8MWY0 1029 aaPredicted RBP17.65■□□□□ 0.42
FGFR1-223ENST00000496296 H2AFB1P0C5Y9 115 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 PRDX2P32119 198 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 CCL8P80075 99 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 ZNF266Q14584 549 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 Q6ZRG5 221 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 GPR146Q96CH1 333 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 KCNIP1Q9NZI2 227 aa17.65■□□□□ 0.42
FGFR1-223ENST00000496296 CHD3Q12873 2000 aaKnown RBP17.64■□□□□ 0.42
FGFR1-223ENST00000496296 FAM24AA6NFZ4 105 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 LRRC30A6NM36 301 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 SIGLEC5O15389 551 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 NUPL2O15504 423 aaKnown RBP17.64■□□□□ 0.41
FGFR1-223ENST00000496296 TNFSF12O43508 249 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 SERPINE2P07093 398 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 PLA2G2AP14555 144 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 HOXA4Q00056 320 aaPredicted RBP17.64■□□□□ 0.41
FGFR1-223ENST00000496296 COL10A1Q03692 680 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 SWI5Q1ZZU3 235 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 CLEC9AQ6UXN8 241 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 ODF3L1Q8IXM7 274 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 PUSL1Q8N0Z8 303 aaKnown RBP17.64■□□□□ 0.41
FGFR1-223ENST00000496296 AIFM2Q9BRQ8 373 aa17.64■□□□□ 0.41
FGFR1-223ENST00000496296 LIN7CQ9NUP9 197 aaKnown RBP17.64■□□□□ 0.41
FGFR1-223ENST00000496296 TRAV39A0A0B4J263 110 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 OOEPA6NGQ2 149 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 FAM74A7A6NL05 159 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 PLAUP00749 431 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 PSG2P11465 335 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 MUC1P15941 1255 aaPredicted RBP17.63■□□□□ 0.41
FGFR1-223ENST00000496296 VAMP2P63027 116 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 FAM74A3Q4VXF1 159 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 PPP1R35Q8TAP8 253 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 SAP30LQ9HAJ7 183 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 CACFD1Q9UGQ2 172 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 A0A0G2JRQ6 117 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 RNF212BA8MTL3 300 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 DEFB108AA8MXU0 73 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 HSPA12AO43301 675 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 SSSCA1O60232 199 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 IGKV1-39P01597 117 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 IGKV1D-39P04432 117 aa17.63■□□□□ 0.41
FGFR1-223ENST00000496296 ZNF672Q499Z4 452 aaPredicted RBP17.63■□□□□ 0.41
FGFR1-223ENST00000496296 F8W036 122 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 RNASEK-C17orf49H0YIS7 233 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 SIAH2O43255 324 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 TMEM50AO95807 157 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 CEACAM6P40199 344 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 PAX9P55771 341 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 CD177Q8N6Q3 437 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 OR51H1Q8NH63 302 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 COQ2Q96H96 371 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 TREM1Q9NP99 234 aa17.62■□□□□ 0.41
FGFR1-223ENST00000496296 FAM157AC9JC47 383 aa17.61■□□□□ 0.41
FGFR1-223ENST00000496296 C12orf77C9JDV5 145 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms