RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 RBPMSQ93062 196 aaKnown RBP3.06□□□□□ -1.92
CCDC39-207ENST00000495817 RAD51AP1Q96B01 352 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 MED10Q9BTT4 135 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF436Q9C0F3 470 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-207ENST00000495817 OR51V1Q9H2C8 321 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 RHOFQ9HBH0 211 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 C8orf4Q9NR00 106 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 TAS2R1Q9NYW7 299 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 TNRC6CQ9HCJ0 1690 aaKnown RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 ADAMTS7Q9UKP4 1686 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 EDC4Q6P2E9 1401 aaKnown RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 NSD3Q9BZ95 1437 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 IGHV3-21A0A0B4J1V1 117 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 FABP12A6NFH5 140 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 LEUTXA8MZ59 168 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 MKRN2OSH3BPM6 223 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 KLRC4-KLRK1H3BQV0 150 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 H3BQV1 296 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 K7ERS5 55 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 TOX3O15405 576 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 ADAP1O75689 374 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 RPP14O95059 124 aaKnown RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 SERPINA6P08185 405 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 SYT1P21579 422 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 G0S2P27469 103 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 SERPINB9P50453 376 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 RBM48Q5RL73 367 aaKnown RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 PLEKHG7Q6ZR37 379 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 C10orf107Q8IVU9 208 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 OR4C13Q8NGP0 309 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 TEX47Q8TBZ9 253 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 C2orf15Q8WU43 125 aaKnown RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 OTUB2Q96DC9 234 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 PGLYRP3Q96LB9 341 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 LINC01587Q99440 93 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 CENPHQ9H3R5 247 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 C3orf18Q9UK00 162 aa3.05□□□□□ -1.92
CCDC39-207ENST00000495817 COL5A3P25940 1745 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-207ENST00000495817 KDM6AO15550 1401 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 RAD50Q92878 1312 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 A0A0A6YYH2 397 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 A6NJ64 397 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 H0YJX3 145 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 PGRMC1O00264 195 aaKnown RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 SULT1C2O00338 296 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 LIN7AO14910 233 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 HLA-AP01891 365 aaKnown RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 IFNA6P05013 189 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 IL6P05231 212 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 CTXN2P0C2S0 81 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 OCMP0CE72 109 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF35P13682 527 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 GTF2F2P13984 249 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 MSNP26038 577 aaKnown RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ACTR1BP42025 376 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 RAB25P57735 213 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 FMODQ06828 376 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 LDLRAD2Q5SZI1 272 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 NXNL2Q5VZ03 156 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 DGAT2L6Q6ZPD8 337 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 FUNDC1Q8IVP5 155 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 C3orf22Q8N5N4 141 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ZIC4Q8N9L1 334 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 OR5D18Q8NGL1 313 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF721Q8TF20 911 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 PPWD1Q96BP3 646 aaKnown RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 DDIT4LQ96D03 193 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 FAAP24Q9BTP7 215 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 TAPBPLQ9BX59 468 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ULBP1Q9BZM6 244 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 TAS2R13Q9NYV9 303 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF492Q9P255 531 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 SAMHD1Q9Y3Z3 626 aaKnown RBP3.04□□□□□ -1.92
CCDC39-207ENST00000495817 ITGB4P16144 1822 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 TJP1Q07157 1748 aa3.04□□□□□ -1.92
CCDC39-207ENST00000495817 RTL1A6NKG5 1358 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ROCK2O75116 1388 aaKnown RBP3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ANKRD26Q9UPS8 1709 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 IGKV1OR2-108A0A075B7D4 117 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 F5H5P2 479 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 TNRC18O15417 2968 aaPredicted RBP3.03□□□□□ -1.92
CCDC39-207ENST00000495817 AQP9O43315 295 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ENTPD6O75354 484 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 LYPLA2O95372 231 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 PSKH1P11801 424 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF7P17097 686 aaPredicted RBP3.03□□□□□ -1.92
CCDC39-207ENST00000495817 PYCR1P32322 319 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF235Q14590 738 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 EXOC3L4Q17RC7 722 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 FAM151BQ6UXP7 276 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 PYURFQ96I23 114 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 OR2V2Q96R30 315 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF251Q9BRH9 671 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 RTBDNQ9BSG5 229 aaPredicted RBP3.03□□□□□ -1.92
CCDC39-207ENST00000495817 TXNIPQ9H3M7 391 aa3.03□□□□□ -1.92
CCDC39-207ENST00000495817 TBL2Q9Y4P3 447 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms