RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 UNC79Q9P2D8 2635 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 AKAP9Q99996 3911 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 NYNRINQ9P2P1 1898 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 TMEM72A0PK05 275 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 FAM92AA1XBS5 289 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 GOLGA8RI6L899 631 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 SLC31A1O15431 190 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 NRASP01111 189 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 HRASP01112 189 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 KRASP01116 189 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 IGKV1D-16P01601 117 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 KRT7P08729 469 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 SLC35E2BP0CK96 405 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 CD40LGP29965 261 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 KDELR2P33947 212 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 CRATP43155 626 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 EIF3IQ13347 325 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 TPBGQ13641 420 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 OR4D1Q15615 310 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 DEFB133Q30KQ1 61 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 ZNF678Q5SXM1 525 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 CLEC6AQ6EIG7 209 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 PLCZ1Q86YW0 608 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 CRLF3Q8IUI8 442 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 BOD1L2Q8IYS8 172 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 OR7G1Q8NGA0 311 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 OR5B17Q8NGF7 314 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 NT5CQ8TCD5 201 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 LMX1AQ8TE12 382 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 KLK6Q92876 244 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 FXYD5Q96DB9 178 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 TMA16Q96EY4 203 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 MRPL48Q96GC5 212 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 VAT1Q99536 393 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 C7orf50Q9BRJ6 194 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 C1orf50Q9BV19 199 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 SRRQ9GZT4 340 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 DDIT4Q9NX09 232 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 EURLQ9NYK6 297 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 IL37Q9NZH6 218 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 SLC22A14Q9Y267 594 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 UTP20O75691 2785 aaKnown RBP2.27□□□□□ -2.05
SMC4-224ENST00000494612 NUMA1Q14980 2115 aa2.27□□□□□ -2.05
SMC4-224ENST00000494612 TEP1Q99973 2627 aaKnown RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 USP9XQ93008 2570 aaPredicted RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 FBN2P35556 2912 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 MYO9AB2RTY4 2548 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 PTPN13Q12923 2485 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 C1orf232A0A0U1RR37 186 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 SLC5A10A0PJK1 596 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 F8VZ95 297 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 AQP9O43315 295 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 E2F6O75461 281 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 PFN1P07737 140 aaKnown RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 PET100P0DJ07 73 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ZNF3P17036 446 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 MAGEA3P43357 314 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 UBE2G2P60604 165 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 MYL6P60660 151 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 BAMBIQ13145 260 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 FLOT2Q14254 428 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 BSXQ3C1V8 233 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 C9orf64Q5T6V5 341 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ZNF720Q7Z2F6 126 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 PRNTQ86SH4 94 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ATP6V1C2Q8NEY4 427 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 OR52N1Q8NH53 320 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ZFAND1Q8TCF1 268 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 CCDC127Q96BQ5 260 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 SMIM8Q96KF7 97 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ZNF396Q96N95 335 aaPredicted RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 MRPL20Q9BYC9 149 aaKnown RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 WDR55Q9H6Y2 383 aaPredicted RBP2.26□□□□□ -2.05
SMC4-224ENST00000494612 MAT2BQ9NZL9 334 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 CYB5R1Q9UHQ9 305 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 ACOT9Q9Y305 439 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 FADS3Q9Y5Q0 445 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 U3KQA8 63 aa2.26□□□□□ -2.05
SMC4-224ENST00000494612 KNTC1P50748 2209 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CSMD1Q96PZ7 3565 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SPTA1P02549 2419 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 OR6C70A6NIJ9 312 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 VGLL3A8MV65 326 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 D6RAR5 112 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 MKRN2OSH3BPM6 223 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 M0QXV9 152 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 KPNA3O00505 521 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 PLPP3O14495 311 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SGCEO43556 437 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 CBR3O75828 277 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 SNAP29O95721 258 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 OCMP0CE72 109 aaPredicted RBP2.25□□□□□ -2.05
SMC4-224ENST00000494612 HLA-GP17693 338 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 TEAD1P28347 426 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 MPIP34949 423 aa2.25□□□□□ -2.05
SMC4-224ENST00000494612 ERFP50548 548 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms