RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NPVFQ9HCQ7 196 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 IGKV1D-42A0A075B6H8 117 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 TMEM30BQ3MIR4 351 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 TMEM252Q8N6L7 170 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 A0A087X0M5 115 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 A0A1B0GX30 115 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 A0A1W2PS18 150 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 RIPPLY2Q5TAB7 128 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 C16orf82Q7Z2V1 217 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 PKIBQ9C010 78 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 BET1LQ9NYM9 111 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 COMPP49747 757 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-207ENST00000494090 P2RY4P51582 365 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 CCL8P80075 99 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 IGLV3-21P80748 117 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-207ENST00000494090 IFITM2Q01629 132 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 UBE2V2Q15819 145 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 SAP25Q8TEE9 199 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 SCNM1Q9BWG6 230 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 PILRBQ9UKJ0 227 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 LHFPL6Q9Y693 200 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 RGPD3A6NKT7 1758 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-207ENST00000494090 TRBV23-1A0A0A0MS06 115 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 TRAV34A0A0B4J273 112 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 LMX1BO60663 402 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 CD40P25942 277 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 MPV17P39210 176 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 DNASE2BQ8WZ79 361 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 ERVH48-1M5A8F1 160 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 LOXL3P58215 753 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 LINC01590Q5TEZ4 76 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 TXNDC17Q9BRA2 123 aa16.55■□□□□ 0.24
COL27A1-207ENST00000494090 OPN3Q9H1Y3 402 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-207ENST00000494090 CDK2AP1O14519 115 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 ADRA2AP08913 450 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 COX5BP10606 129 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 MMD2Q8IY49 270 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 STPG3Q8N7X2 389 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 OR2V2Q96R30 315 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 P2RX4Q99571 388 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 PTPRFP10586 1907 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 OR5AU1Q8NGC0 362 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 HSPB8Q9UJY1 196 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 CBY3A6NI87 242 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 CSN3P07498 182 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 GUCA2BQ16661 112 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 MRPL37Q9BZE1 423 aaKnown RBP16.54■□□□□ 0.24
COL27A1-207ENST00000494090 G6PC2Q9NQR9 355 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 HSF4Q9ULV5 492 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 IGHMP01871 453 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 CD1BP29016 333 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 AQP10Q96PS8 301 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 CCL13Q99616 98 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 PAXXQ9BUH6 204 aa16.54■□□□□ 0.24
COL27A1-207ENST00000494090 ARID1AO14497 2285 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 DHRS7CA6NNS2 312 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 F12P00748 615 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-207ENST00000494090 CELA2AP08217 269 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 GBGT1Q8N5D6 347 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 RAB24Q969Q5 203 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 SBF2Q86WG5 1849 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 HKR1P10072 659 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 SCGB1D4Q6XE38 83 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 AP5S1Q9NUS5 200 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 TUBD1Q9UJT1 453 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 HBZP02008 142 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 ZNF735P0CB33 412 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 ZNF343Q6P1L6 599 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 RUNX1Q01196 453 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 EBLN2Q6P2I7 272 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 MIOXQ9UGB7 285 aa16.53■□□□□ 0.24
COL27A1-207ENST00000494090 OR10J1P30954 320 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 PPOXP50336 477 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 SLC25A45Q8N413 288 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 CYB561D1Q8N8Q1 229 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 MGPP08493 103 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 MYOZ3Q8TDC0 251 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 LPAR2Q9HBW0 351 aa16.52■□□□□ 0.24
COL27A1-207ENST00000494090 NKX2-8O15522 239 aa16.52■□□□□ 0.23
COL27A1-207ENST00000494090 NSUN5P2Q63ZY6 315 aa16.52■□□□□ 0.23
COL27A1-207ENST00000494090 MRPL54Q6P161 138 aaKnown RBP16.52■□□□□ 0.23
COL27A1-207ENST00000494090 OR4A5Q8NH83 315 aa16.52■□□□□ 0.23
COL27A1-207ENST00000494090 CISD1Q9NZ45 108 aaKnown RBP16.52■□□□□ 0.23
COL27A1-207ENST00000494090 SCTP09683 121 aa16.52■□□□□ 0.23
COL27A1-207ENST00000494090 CFDP00746 253 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-207ENST00000494090 DLX1P56177 255 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 SAXO1Q8IYX7 474 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 ZNF383Q8NA42 475 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 OR8G5Q8NG78 346 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 ATG2BQ96BY7 2078 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 CD74P04233 296 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 FAM3BP58499 235 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-207ENST00000494090 OR11H4Q8NGC9 324 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 SFXN3Q9BWM7 321 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 IGKV3-7A0A075B6H7 116 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 KLF4O43474 513 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 H2BFSP57053 126 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 PUSL1Q8N0Z8 303 aaKnown RBP16.51■□□□□ 0.23
COL27A1-207ENST00000494090 ITLN1Q8WWA0 313 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 HS3ST3B1Q9Y662 390 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms