RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 A8MXK9 166 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 CCL21O00585 134 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 SIGLEC5O15389 551 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 NXPH3O95157 252 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 TMEM50AO95807 157 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 CGB3P0DN86 165 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 CGB7P0DN87 165 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF16P17020 682 aaPredicted RBP8.84□□□□□ -0.99
CLCN6-208ENST00000494028 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
CLCN6-208ENST00000494028 AKR1C2P52895 323 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 EDDM3BP56851 147 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 ID3Q02535 119 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 CATR1Q13166 79 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 ATMQ13315 3056 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 LTC4SQ16873 150 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 IZUMO4Q1ZYL8 232 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 C17orf58Q2M2W7 97 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
CLCN6-208ENST00000494028 OR2C3Q8N628 320 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
CLCN6-208ENST00000494028 RFESDQ8TAC1 157 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 MAGT1Q9H0U3 335 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 FAM234AQ9H0X4 552 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 IFI27L2Q9H2X8 130 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF665Q9H7R5 613 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 OR6C3Q9NZP0 311 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 RNF150Q9ULK6 438 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 PSG11Q9UQ72 335 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 RNF115Q9Y4L5 304 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 ATRXP46100 2492 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 ARFGEF3Q5TH69 2177 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 HCFC1P51610 2035 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 FAM24AA6NFZ4 105 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 B8ZZF3 427 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 LGALS8O00214 317 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 SIAH2O43255 324 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 YPEL1O60688 119 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 S1PR2O95136 353 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 GYPAP02724 150 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 IRF2P14316 349 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 MUC1P15941 1255 aaPredicted RBP8.83□□□□□ -1
CLCN6-208ENST00000494028 TNFRSF1AP19438 455 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 PVALBP20472 110 aaPredicted RBP8.83□□□□□ -1
CLCN6-208ENST00000494028 LOXL3P58215 753 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 VAMP2P63027 116 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 CCL8P80075 99 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 CDSNQ15517 529 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 EFNB3Q15768 340 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 MST1LQ2TV78 715 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 OR2B11Q5JQS5 317 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 CLEC9AQ6UXN8 241 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 ZNF66Q6ZN08 573 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 Q6ZRM9 215 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 FGFRL1Q8N441 504 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 UBAC2Q8NBM4 344 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 OR1S2Q8NGQ3 325 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 LRRC20Q8TCA0 184 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 TCTEX1D2Q8WW35 142 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 EDARADDQ8WWZ3 215 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 LINC00052Q96N35 136 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 YPEL2Q96QA6 119 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 CCL13Q99616 98 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 AGMATQ9BSE5 352 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 SAP30LQ9HAJ7 183 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 FAM212BQ9NTI7 297 aaPredicted RBP8.83□□□□□ -1
CLCN6-208ENST00000494028 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 GNG12Q9UBI6 72 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 LPAR3Q9UBY5 353 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 SESN1Q9Y6P5 492 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 POLEQ07864 2286 aa8.83□□□□□ -1
CLCN6-208ENST00000494028 PRRC2CQ9Y520 2896 aaKnown RBP8.83□□□□□ -1
CLCN6-208ENST00000494028 NBEAQ8NFP9 2946 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 PIEZO2Q9H5I5 2752 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 LINC00473A8K010 186 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 C17orf98A8MV24 154 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 DEFB108AA8MXU0 73 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 SLC31A2O15432 143 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 RAMP3O60896 148 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 FCN3O75636 299 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 JTBO76095 146 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 CD3EP07766 207 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 FAM157CP0CG43 387 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 LOXP28300 417 aaPredicted RBP8.82□□□□□ -1
CLCN6-208ENST00000494028 LPAR6P43657 344 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 SULT1A2P50226 295 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 CAV2P51636 162 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 PAX9P55771 341 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 BRWD1-AS2P59051 145 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 ZNF816Q0VGE8 651 aaPredicted RBP8.82□□□□□ -1
CLCN6-208ENST00000494028 MORN2Q502X0 79 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 MIDNQ504T8 468 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 UTF1Q5T230 341 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 TMEM252Q8N6L7 170 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 TCTEX1D1Q8N7M0 179 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 DEFB108BQ8NET1 73 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 RNF141Q8WVD5 230 aa8.82□□□□□ -1
CLCN6-208ENST00000494028 HSD17B10Q99714 261 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms