RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 ORC5O43913 435 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 MFSD11O43934 449 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 MT-CO2P00403 227 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 ELK1P19419 428 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 CCL1P22362 96 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 HSPA9P38646 679 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 CXCL5P42830 114 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 NMUP48645 174 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 INPP1P49441 399 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 PSMB3P49720 205 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 PSPHP78330 225 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 CCDC153Q494R4 210 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 ABCA11PQ4W5N1 156 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 MPV17L2Q567V2 206 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 TMEM78Q5T7P6 136 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 NANOGP8Q6NSW7 305 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 GUSBP11Q6P575 273 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 SBSNQ6UWP8 590 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 SLC16A13Q7RTY0 426 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 TMEM75Q8N9X5 138 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 DCAF4L2Q8NA75 395 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 LINC01555Q8NAE3 123 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 C20orf203Q8NBC4 194 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 LY6G5BQ8NDX9 201 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 ZNF555Q8NEP9 628 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 LHFPL5Q8TAF8 219 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 SKA2Q8WVK7 121 aaPredicted RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 C12orf43Q96C57 262 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 OR2M2Q96R28 347 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 CAMK2N2Q96S95 79 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 CDX2Q99626 313 aaPredicted RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 RNASE7Q9H1E1 156 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 NANOGQ9H9S0 305 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 SPANXA1Q9NS26 97 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 RSL24D1Q9UHA3 163 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 NUFIP1Q9UHK0 495 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 FIS1Q9Y3D6 152 aa2.19□□□□□ -2.06
VPS36-205ENST00000492650 PCYT1BQ9Y5K3 369 aaPredicted RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 ZNF706Q9Y5V0 76 aaPredicted RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 DNMT1P26358 1616 aaKnown RBP2.19□□□□□ -2.06
VPS36-205ENST00000492650 PLCH2O75038 1416 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 ATRNO75882 1429 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 YTHDC2Q9H6S0 1430 aaKnown RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 LOC102724200A0A096LPH7 203 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 IGHV1OR15-9A0A0B4J2B8 117 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 IGHV3-66A0A0C4DH42 116 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 MAP1LC3B2A6NCE7 125 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 C9JQL5 133 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 INS-IGF2F8WCM5 200 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 C1QBP02746 253 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 P0C879 139 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 SRP9P49458 86 aaKnown RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 AP1S1P61966 158 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 SNRPD2P62316 118 aaKnown RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 IL15RAQ13261 267 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 ELOCQ15369 112 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 SURF2Q15527 256 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 MPPED2Q15777 294 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 TMEM128Q5BJH2 165 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 AKR1C8PQ5T2L2 129 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 TMPPEQ6ZT21 453 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 GOLT1AQ6ZVE7 132 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 FA2HQ7L5A8 372 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 MARCH3Q86UD3 253 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 ZBTB8OSQ8IWT0 167 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 EIF4E3Q8N5X7 224 aaKnown RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 C14orf178Q8N769 122 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 YIPF7Q8N8F6 280 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 SLC25A29Q8N8R3 303 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 OR2M3Q8NG83 312 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 OR11H6Q8NGC7 330 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 OR8B12Q8NGG6 310 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 GRPEL2Q8TAA5 225 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 FAM57AQ8TBR7 257 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 GNPDA2Q8TDQ7 276 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 C15orf40Q8WUR7 153 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 APOBEC3DQ96AK3 386 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 GPER1Q99527 375 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 KLF6Q99612 283 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 MAP1LC3BQ9GZQ8 125 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 FGF23Q9GZV9 251 aaPredicted RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 SH3BGRL3Q9H299 93 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 OR52D1Q9H346 318 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 LRTM1Q9HBL6 345 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 NOX3Q9HBY0 568 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 CA10Q9NS85 328 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 UQCC1Q9NVA1 299 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 GSKIPQ9P0R6 139 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 PRNDQ9UKY0 176 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 RFNGQ9Y644 331 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 PXMP4Q9Y6I8 212 aa2.18□□□□□ -2.06
VPS36-205ENST00000492650 DHX57Q6P158 1386 aaKnown RBP2.18□□□□□ -2.06
VPS36-205ENST00000492650 DCCP43146 1447 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 SETD5Q9C0A6 1442 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 SIGLEC1Q9BZZ2 1709 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 IGHV3-72A0A0B4J1Y9 119 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 TRAV26-2A0A0B4J265 109 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 TRAPPC13A5PLN9 417 aa2.17□□□□□ -2.06
VPS36-205ENST00000492650 TMEM150BA6NC51 233 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms