RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CD52P31358 61 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 GLP1RP43220 463 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 RAB5CP51148 216 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TAS2R19P59542 299 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 RPS11P62280 158 aaKnown RBP eCLIP3.91□□□□□ -1.78
RTN4-215ENST00000491592 TEAD2Q15562 447 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 PRSS8Q16651 343 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 CLEC12BQ2HXU8 276 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TMEM244Q5VVB8 128 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 CYB5R2Q6BCY4 276 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 WDR82Q6UXN9 313 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 NAA40Q86UY6 237 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TMEM219Q86XT9 240 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 DND1Q8IYX4 353 aaKnown RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 BPIFB2Q8N4F0 458 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 WDSUB1Q8N9V3 476 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TMEM229BQ8NBD8 167 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 SLC26A10Q8NG04 563 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 OR4C16Q8NGL9 310 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 OR1J1Q8NGS3 322 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 OR13G1Q8NGZ3 307 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 RXFP4Q8TDU9 374 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 Q8WTZ3 238 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 EXOSC8Q96B26 276 aaKnown RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 MALSU1Q96EH3 234 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 CPNE2Q96FN4 548 aaPredicted RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 ZNF488Q96MN9 340 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 IL17FQ96PD4 163 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 SCGB3A2Q96PL1 93 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 DUX3Q96PT4 197 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TBX15Q96SF7 602 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 PDCD1LG2Q9BQ51 273 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 CMSS1Q9BQ75 279 aaKnown RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 AGMATQ9BSE5 352 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 ZNF471Q9BX82 626 aaPredicted RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 C1QTNF4Q9BXJ3 329 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 OR11A1Q9GZK7 315 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 UQCC1Q9NVA1 299 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 KLK11Q9UBX7 282 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 ZNF223Q9UK11 482 aaPredicted RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 SLC7A11Q9UPY5 501 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 C14orf166Q9Y224 244 aaKnown RBP3.91□□□□□ -1.78
RTN4-215ENST00000491592 HS3ST2Q9Y278 367 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 TP53TG1Q9Y2A0 90 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 PLXND1Q9Y4D7 1925 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 FRMPD3Q5JV73 1810 aa3.91□□□□□ -1.78
RTN4-215ENST00000491592 IGHV4OR15-8A0A075B7B6 117 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 TRBV6-7A0A0A0MS04 114 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CENPVL3A0A0U1RRI6 287 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 GLTPD2A6NH11 291 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 FAM183AA6NL82 134 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 F5H5K5 113 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 C15orf65H3BRN8 121 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 SULT2B1O00204 365 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 MFNGO00587 321 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 MRPS12O15235 138 aaKnown RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 DUSP11O75319 330 aaKnown RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 LYPD3O95274 346 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 IFNA10P01566 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 HMGN2P05204 90 aaKnown RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 CTSLP07711 333 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 OR5AL1P0C617 328 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CT45A6P0DMU7 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CT45A5P0DMU8 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CT45A7P0DMV0 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 HLA-DOBP13765 273 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 MYOD1P15172 320 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 RAB5AP20339 215 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 HIST1H1TP22492 207 aaPredicted RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 CD34P28906 385 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 RPL12P30050 165 aaKnown RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 CHRNB4P30926 498 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 PRSS3P35030 304 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 KIR2DS4P43632 304 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 TSFMP43897 325 aaKnown RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 NCBP2P52298 156 aaKnown RBP eCLIP3.9□□□□□ -1.79
RTN4-215ENST00000491592 SLC7A9P82251 487 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 FUT5Q11128 374 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 RIGQ13278 110 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 ZNF234Q14588 700 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 DUSP5Q16690 384 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 HLA-DRB5Q30154 266 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CT45A1Q5HYN5 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 FAM74A1Q5RGS3 127 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 C9orf64Q5T6V5 341 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 C22orf39Q6P5X5 142 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 TMEM205Q6UW68 189 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 GFRALQ6UXV0 394 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 STAC2Q6ZMT1 411 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 CBLN2Q8IUK8 224 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 BAP18Q8IXM2 172 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 ZNF433Q8N7K0 673 aaPredicted RBP3.9□□□□□ -1.79
RTN4-215ENST00000491592 ZDHHC22Q8N966 263 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 ACOT4Q8N9L9 421 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 OR4K17Q8NGC6 315 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 OR2G2Q8NGZ5 317 aa3.9□□□□□ -1.79
RTN4-215ENST00000491592 OR8U1Q8NH10 309 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms