RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZNF727A8MUV8 499 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 A8MXK9 166 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ATP6V1G2-DDX39BF2Z307 99 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 NDUFA2O43678 99 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 DANCRP0C864 163 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF146Q15072 292 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CXorf66Q5JRM2 361 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF429Q86V71 674 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 DRAM1Q8N682 238 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MBD3L2Q8NHZ7 208 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 SPOCK3Q9BQ16 436 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 F6UZH7 168 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 MUC1P15941 1255 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 C15orf54Q8N8G6 183 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR5T1Q8NG75 326 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 PRR7Q8TB68 274 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 PARD6AQ9NPB6 346 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 MANBALQ9NQG1 85 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 SLC35D1Q9NTN3 355 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 SLC25A10Q9UBX3 287 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF729A6NN14 1252 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 FAM90A27PA6NNH2 459 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 LYL1P12980 280 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 CEBPDP49716 269 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 LGALS4P56470 323 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 IGFL3Q6UXB1 125 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 WDR31Q8NA23 367 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR4F5Q8NH21 305 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR4F4Q96R69 305 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 C20orf24Q9BUV8 137 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 GCM1Q9NP62 436 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 CALYQ9NYX4 217 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 MDFIC2A0A1B0GVS7 189 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR4A8P0C604 315 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ADIRFQ15847 76 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR10G4Q8NGN3 311 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR10G9Q8NGN4 311 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 OR10G7Q8NGN6 311 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ASCL3Q9NQ33 180 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 KIAA1456Q9P272 454 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 IGHV1-18A0A0C4DH31 117 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 CD40P25942 277 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 BPIFB3P59826 476 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 SPCS3P61009 180 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 PNRC1Q12796 327 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 RNFT1Q5M7Z0 435 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF324BQ6AW86 544 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ETFRF1Q6IPR1 90 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 Q6ZS92 163 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-208ENST00000490993 SSC4DQ8WTU2 575 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 STARD4Q96DR4 205 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF251Q9BRH9 671 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 IDI2-AS1Q9NZ38 188 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 IL36RNQ9UBH0 155 aa6.22□□□□□ -1.41
NPHP3-208ENST00000490993 A0A1W2PN81 502 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 H0YL77 283 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 TM4SF5O14894 197 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 ACAA1P09110 424 aaPredicted RBP6.21□□□□□ -1.41
NPHP3-208ENST00000490993 NTF4P34130 210 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 CHRNA7P36544 502 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 GLIPR1P48060 266 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 PLPPR1Q8TBJ4 325 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 RAB1CQ92928 201 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 PLPPR2Q96GM1 343 aa6.21□□□□□ -1.41
NPHP3-208ENST00000490993 MSGN1A6NI15 193 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 MPTX1A8MV57 137 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 B4DEV8 164 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 NPIPB11E5RHQ5 1161 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 WDR82Q6UXN9 313 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 MPDZO75970 2070 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 H0YIZ8 118 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 K7N7A8 449 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 FGF16O43320 207 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 MPDU1O75352 247 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF737O75373 536 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 KHDC3LQ587J8 217 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 RBKSQ9H477 322 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 WNT9BO14905 357 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 TXNL1O43396 289 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CT45A6P0DMU7 189 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CT45A5P0DMU8 189 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CT45A7P0DMV0 189 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CDC34P49427 236 aaPredicted RBP6.21□□□□□ -1.42
NPHP3-208ENST00000490993 RPL31P62899 125 aaKnown RBP6.21□□□□□ -1.42
NPHP3-208ENST00000490993 HTD2P86397 168 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CT45A1Q5HYN5 189 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM88Q6PEY1 159 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CT45A3Q8NHU0 189 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF714Q96N38 554 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 CCL13Q99616 98 aa6.21□□□□□ -1.42
NPHP3-208ENST00000490993 FOXI3A8MTJ6 420 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-208ENST00000490993 IGKV3-15P01624 115 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 RPL35P42766 123 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms