RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 DPCDQ9BVM2 203 aaPredicted RBP5.14□□□□□ -1.59
PDLIM1-203ENST00000490391 SCRT1Q9BWW7 348 aa5.14□□□□□ -1.59
PDLIM1-203ENST00000490391 GNG12Q9UBI6 72 aa5.14□□□□□ -1.59
PDLIM1-203ENST00000490391 TMEM14AQ9Y6G1 99 aa5.14□□□□□ -1.59
PDLIM1-203ENST00000490391 TNXBP22105 4242 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 SAA2-SAA4A0A096LPE2 208 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 A8MWP6 167 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 TNFRSF11BO00300 401 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 KRT36O76013 467 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 FADS2O95864 444 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 HLA-AP01891 365 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 FABP3P05413 133 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 SAA2P0DJI9 122 aaPredicted RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 CXCR4P61073 352 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 RPS7P62081 194 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 RPS16P62249 146 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 PPP1R8Q12972 351 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 ALKBH1Q13686 389 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 FXYD3Q14802 87 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 PSG5Q15238 335 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 TMEM30BQ3MIR4 351 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 PIGYQ3MUY2 71 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 GLYATQ6IB77 296 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 CD300LDQ6UXZ3 194 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 SPATA12Q7Z6I5 190 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 LYPD1Q8N2G4 141 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 PRSS35Q8N3Z0 413 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 OR2C3Q8N628 320 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 OR1L6Q8NGR2 347 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 OR10AC1Q8NH08 325 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 OR1L1Q8NH94 360 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 TEX47Q8TBZ9 253 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 CCDC107Q8WV48 283 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 GHSRQ92847 366 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 GALNT14Q96FL9 552 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 NR1H4Q96RI1 486 aaPredicted RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 KCTD14Q9BQ13 255 aaPredicted RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 IFT22Q9H7X7 185 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 ABCD2Q9UBJ2 740 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 METTL1Q9UBP6 276 aaKnown RBP5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 UBQLN2Q9UHD9 624 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 MAGEL2Q9UJ55 1249 aa5.13□□□□□ -1.59
PDLIM1-203ENST00000490391 TRAV25A0A0B4J276 109 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 A0A0G2JND7 137 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 FAM90A23PA8MXZ1 464 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 PPP5D1E7EU14 171 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 SLC22A1O15245 554 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 RPP14O95059 124 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CCNB2O95067 398 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 HBZP02008 142 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 MT-ND4P03905 459 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CT45A6P0DMU7 189 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CT45A5P0DMU8 189 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CT45A7P0DMV0 189 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 DBTP11182 482 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 XGP55808 180 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ADARB1P78563 741 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 EXOSC2Q13868 293 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 GNMTQ14749 295 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 MAPRE2Q15555 327 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ZSCAN26Q16670 478 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 MICAQ29983 383 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 MORN2Q502X0 79 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 BTNL8Q6UX41 500 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ZNF497Q6ZNH5 498 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 SSX6Q7RTT6 188 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ZNF367Q7RTV3 350 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 LINC00596Q86U02 117 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 UXS1Q8NBZ7 420 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ADAD2Q8NCV1 583 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 ANAPC16Q96DE5 110 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CNN2Q99439 309 aaKnown RBP5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 NIPSNAP1Q9BPW8 284 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 CSTL1Q9H114 145 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 GORASP2Q9H8Y8 452 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 NEK6Q9HC98 313 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 AKIP1Q9NQ31 210 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 SAR1AQ9NR31 198 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
PDLIM1-203ENST00000490391 TRBV9A0A0B4J1U6 114 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 OR5H14A6NHG9 310 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 FAM90A7PA6NKC0 464 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 MPTX1A8MV57 137 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 H0YJW9 148 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 H3BN98 237 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 RBBP9O75884 186 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 SPDEFO95238 335 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 OR2C1O95371 312 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 IFNA10P01566 189 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 SCTP09683 121 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 C8orf88P0DMB2 117 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 TMEM225BP0DP42 221 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 PJVKQ0ZLH3 352 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 FHL2Q14192 279 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 GINS1Q14691 196 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 SERTAD4-AS1Q5TG53 156 aa5.11□□□□□ -1.59
PDLIM1-203ENST00000490391 FAM71F2Q6NXP2 309 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms