RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TCEANCQ8N8B7 351 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PLPP5Q8NEB5 264 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR13C8Q8NGS7 320 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR13D1Q8NGV5 346 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PPTC7Q8NI37 304 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SMIM4Q8WVI0 70 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TMED6Q8WW62 240 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CLDN23Q96B33 292 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 IMP4Q96G21 291 aaKnown RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PLEKHA1Q9HB21 404 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HRASLSQ9HDD0 168 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 KCNJ16Q9NPI9 418 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SPHK2Q9NRA0 654 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PCYT1BQ9Y5K3 369 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NUP214P35658 2090 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MYO10Q9HD67 2058 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PIKFYVEQ9Y2I7 2098 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 UMAD1C9J7I0 102 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 C11orf98E9PRG8 122 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MFSD11O43934 449 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 VAMP5O95183 116 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 LRATO95237 230 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 IGHV3-23P01764 117 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NGFRP08138 427 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SOD3P08294 240 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HLA-GP17693 338 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 APLNRP35414 380 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GPR1P46091 355 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 THBS3P49746 956 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PAX9P55771 341 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 UBE2G2P60604 165 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 UBE2KP61086 200 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ARF6P62330 175 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 RANP62826 216 aaKnown RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 BTN3A2P78410 334 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 DEFB115Q30KQ5 88 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PRR30Q53SZ7 412 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TRIM40Q6P9F5 258 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CLEC18BQ6UXF7 455 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HEPN1Q6WQI6 88 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CLEC20AQ6ZU45 233 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF547Q8IVP9 402 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR11G2Q8NGC1 345 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 STAG3L4Q8TBR4 150 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ABHD3Q8WU67 409 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BLQ99880 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TBL1XR1Q9BZK7 514 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR2J1Q9GZK6 312 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR8D2Q9GZM6 311 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF442Q9H7R0 627 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF581Q9P0T4 197 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CACFD1Q9UGQ2 172 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR52A1Q9UKL2 312 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SCN8AQ9UQD0 1980 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 IGKV1D-13A0A0B4J2D9 117 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 DHRS7CA6NNS2 312 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 H7C417 338 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GSTZ1O43708 216 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BKO60814 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NDUFB6O95139 128 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BJP06899 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 IGKV1-13P0DP09 117 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GZMBP10144 247 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF7P17097 686 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BOP23527 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BBP33778 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ARL2P36404 184 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TAF6P49848 677 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BDP58876 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BCP62807 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TAF9Q16594 264 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST2H2BEQ16778 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MUC21Q5SSG8 566 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GFI1BQ5VTD9 330 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NCBP2-AS2Q69YL0 99 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SFXN4Q6P4A7 337 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 DRAM2Q6UX65 266 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 UNQ9370/PRO34162Q6UXP9 181 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GRINAQ7Z429 371 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MYPOPQ86VE0 399 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CALHM3Q86XJ0 350 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 WDFY1Q8IWB7 410 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 FBXO16Q8IX29 292 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 C2orf73Q8N5S3 287 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 EID2Q8N6I1 236 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF615Q8N8J6 731 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR5D16Q8NGK9 328 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR5L1Q8NGL2 311 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 C7orf33Q8WU49 177 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 OR5P2Q8WZ92 322 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BHQ93079 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PPCDCQ96CD2 204 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TM4SF18Q96CE8 201 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BNQ99877 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 HIST1H2BMQ99879 126 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 FOXC2Q99958 501 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NIPSNAP1Q9BPW8 284 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF649Q9BS31 505 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms