RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM58AQ8N1B3 248 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 MTURNQ8N3F0 131 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 C5orf17Q8NAS9 161 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 STXBP6Q8NFX7 210 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 OR1N2Q8NGR9 330 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC25A40Q8TBP6 338 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 NT5CQ8TCD5 201 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 DOK4Q8TEW6 326 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF721Q8TF20 911 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 FAM222BQ8WU58 562 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 RNF133Q8WVZ7 376 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 SARAFQ96BY9 339 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 SMIM10Q96HG1 83 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 GUCD1Q96NT3 240 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 RAB40CQ96S21 281 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 SSBP4Q9BWG4 385 aaPredicted RBP4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 PBOV1Q9GZY1 135 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM222Q9H0R3 208 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 TXNIPQ9H3M7 391 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 LIME1Q9H400 295 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 GNB4Q9HAV0 340 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 LYRM4Q9HD34 91 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 MBNL1Q9NR56 388 aaKnown RBP4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 ABI3Q9P2A4 366 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 NXT1Q9UKK6 140 aaKnown RBP4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 DAPP1Q9UN19 280 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 RNF114Q9Y508 228 aa4.07□□□□□ -1.76
SNRNP40-206ENST00000489853 PPIAL4EA0A075B759 164 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PPIAL4CA0A0B4J2A2 164 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 LOC101059948A0A1B0GTJ6 334 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 A0A1W2PP11 408 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PPIAL4DF5H284 164 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 H0YJW9 148 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 FCN1O00602 326 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 NUDT3O95989 172 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CA2P00918 260 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 TNFP01375 233 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PPIAL4FP0DN26 164 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CTLA4P16410 223 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 AZU1P20160 251 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF10P21506 573 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CMPK1P30085 196 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 SRD5A2P31213 254 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 OPRM1P35372 400 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 GPR6P46095 362 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF133P52736 654 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CRYBA4P53673 196 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 FKBP1BP68106 108 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 POU3F1Q03052 451 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF90Q03938 601 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 EGR4Q05215 589 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM267Q0VDI3 215 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 MALLQ13021 153 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 ACKR1Q16570 336 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 C5orf64Q2M2E5 130 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PHLDA2Q53GA4 152 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 MPV17L2Q567V2 206 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CLLU1OSQ5K130 101 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 OTPQ5XKR4 325 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 UFSP1Q6NVU6 142 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 C1orf122Q6ZSJ8 110 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 RNF144BQ7Z419 303 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 SUMF1Q8NBK3 374 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 OR2M3Q8NG83 312 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 SSC4DQ8WTU2 575 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 SOCS4Q8WXH5 440 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 FGF14Q92915 247 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 NUS1Q96E22 293 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 SFRP2Q96HF1 295 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 RAX2Q96IS3 184 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 KCNS1Q96KK3 526 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 FOXN4Q96NZ1 517 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 GPER1Q99527 375 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 STRADBQ9C0K7 418 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 WDR61Q9GZS3 305 aaKnown RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 ST20Q9HBF5 79 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CENPMQ9NSP4 180 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PLEKHJ1Q9NW61 149 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 PLA2G3Q9NZ20 509 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 CD207Q9UJ71 328 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 MCTS1Q9ULC4 181 aaKnown RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 WASHC3Q9Y3C0 194 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 TIMM9Q9Y5J7 89 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 KIAA2026Q5HYC2 2103 aa4.06□□□□□ -1.76
SNRNP40-206ENST00000489853 TRAV8-6A0A0B4J262 113 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 PIGBOS1A0A0B4J2F0 54 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CTXND1A0A1B0GTU2 59 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MDFIC2A0A1B0GVS7 189 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 K7ESM1 405 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 ADAM20O43506 726 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 PDE6DO43924 150 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF324O75467 553 aaPredicted RBP4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 HAND1O96004 215 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 MT-ND6P03923 174 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 CT62P0C5K7 136 aa4.05□□□□□ -1.76
SNRNP40-206ENST00000489853 LINC00869P0C866 280 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms