RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ZNF20P17024 532 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
SSBP1-212ENST00000489378 PLGLAQ15195 96 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 RBMS2Q15434 407 aaKnown RBP6.79□□□□□ -1.32
SSBP1-212ENST00000489378 ELP2Q6IA86 826 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 RAB12Q6IQ22 244 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 ZNF645Q8N7E2 425 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 BVESQ8NE79 360 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 C2CD4CQ8TF44 421 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 TBX5Q99593 518 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 REEP1Q9H902 201 aa6.79□□□□□ -1.32
SSBP1-212ENST00000489378 RBMXL2O75526 392 aaKnown RBP6.78□□□□□ -1.32
SSBP1-212ENST00000489378 MT-ND2P03891 347 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 IFNA4P05014 189 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 UBCP0CG48 685 aaKnown RBP6.78□□□□□ -1.32
SSBP1-212ENST00000489378 HSD17B1P14061 328 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 OR3A3P47888 321 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 TCTAP57738 103 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 IL13RA2Q14627 380 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 GNMTQ14749 295 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 OR2T5Q6IEZ7 315 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 FAM131AQ6UXB0 335 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 KCTD20Q7Z5Y7 419 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 Q8N1X5 172 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 OR10K1Q8NGX5 313 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 OR2T29Q8NH02 315 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 OR1L1Q8NH94 360 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 GRPEL2Q8TAA5 225 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 FGFR1OP2Q9NVK5 253 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 CLN6Q9NWW5 311 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 TVP23BQ9NYZ1 205 aa6.78□□□□□ -1.32
SSBP1-212ENST00000489378 METTL15A6NJ78 407 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 C2orf70A6NJV1 201 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 IGLL5B9A064 214 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 H3BUA1 57 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 M0R2N4 97 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 BMPR1BO00238 502 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 CDK2AP2O75956 126 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 CA2P00918 260 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 MT-ND4P03905 459 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 OSMP13725 252 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 FOLR2P14207 255 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 APOC4P55056 127 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 ADARB1P78563 741 aaKnown RBP6.77□□□□□ -1.33
SSBP1-212ENST00000489378 KISS1Q15726 138 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 STEAP3Q658P3 488 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF562Q6V9R5 426 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 CYP2R1Q6VVX0 501 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 TMEM61Q8N0U2 210 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 PRR18Q8N4B5 295 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 OR51A4Q8NGJ6 313 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 OR52B4Q8NGK2 314 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 C11orf45Q8TAV5 145 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 GIPC3Q8TF64 312 aa6.77□□□□□ -1.33
SSBP1-212ENST00000489378 A0A1W2PQL4 384 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 M0R129 80 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 AIPO00170 330 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SPINT2O43291 252 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 PRKYO43930 277 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 OR7C1O76099 320 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 HBZP02008 142 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 HOXA5P20719 270 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ATP6V1B2P21281 511 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 AADACP22760 399 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ALKBH1Q13686 389 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF691Q5VV52 312 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 LPCAT4Q643R3 524 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF497Q6ZNH5 498 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 C5orf24Q7Z6I8 188 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 CACNG8Q8WXS5 425 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SNAPC3Q92966 411 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 ABHD14AQ9BUJ0 271 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 TINAGL1Q9GZM7 467 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 MFFQ9GZY8 342 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 MED4Q9NPJ6 270 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SCRT2Q9NQ03 307 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 TECRQ9NZ01 308 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 METTL1Q9UBP6 276 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 FBXL7Q9UJT9 491 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SAA2-SAA4A0A096LPE2 208 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SCAF4O95104 1147 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 FADS2O95864 444 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SAA2P0DJI9 122 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 PPP1CCP36873 323 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 SSBP2P81877 361 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 FXYD3Q14802 87 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 MORN2Q502X0 79 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 TMEM177Q53S58 311 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 GLDNQ6ZMI3 551 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 PXT1Q8NFP0 134 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 OR52L2PQ8NGH6 319 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 OR2S2Q9NQN1 319 aa6.76□□□□□ -1.33
SSBP1-212ENST00000489378 RCC2Q9P258 522 aaKnown RBP6.76□□□□□ -1.33
SSBP1-212ENST00000489378 DNAH5Q8TE73 4624 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TCRBV5S2A0A599 114 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 UBE2CO00762 179 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 GEMIN2O14893 280 aaKnown RBP6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TSC22D2O75157 780 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms