RNA–Protein interactions for RNA: ENST00000489344.5

RBM3-208, Transcript of RNA binding motif protein 3, human

TSL 2

Gene RBM3, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-208	ENST00000489344	SAMD12	Q8N8I0	201 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	OR4P4	Q8NGL7	312 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	RFESD	Q8TAC1	157 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	DYNC2LI1	Q8TCX1	351 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	AP3S1	Q92572	193 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	ARL11	Q969Q4	196 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	S100A16	Q96FQ6	103 aa	Known RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	CMTM3	Q96MX0	182 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	NOL4L	Q96MY1	436 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	CMSS1	Q9BQ75	279 aa	Known RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	RBM38	Q9H0Z9	239 aa	Known RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	LINC00574	Q9H8X3	128 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	MBNL3	Q9NUK0	354 aa	Known RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	CALY	Q9NYX4	217 aa		10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	RSL24D1	Q9UHA3	163 aa	Known RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM3-208	ENST00000489344		A0A0A6YYH2	397 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344		A6NJ64	397 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	SERPINE3	A8MV23	424 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	SEC14L6	B5MCN3	397 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	C15orf65	H3BRN8	121 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	ZNF701	M0R085	212 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	MFNG	O00587	321 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	NAPSA	O96009	420 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	CD3G	P09693	182 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	GDNF	P39905	211 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	DEFB136	Q30KP8	78 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	ZNF260	Q3ZCT1	412 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	C6orf183	Q5T699	404 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	PRAMEF5	Q5TYX0	476 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	TRAT1	Q6PIZ9	186 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	OVCH2	Q7RTZ1	564 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	OR10A7	Q8NGE5	316 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	OR5M8	Q8NGP6	311 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	CITED4	Q96RK1	184 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	TMEM133	Q9H2Q1	129 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	IDI2-AS1	Q9NZ38	188 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	KCNIP1	Q9NZI2	227 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	NDUFA13	Q9P0J0	144 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	DPM3	Q9P2X0	92 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	LINC00527	Q9UJ94	153 aa		10.87	□□□□□ -0.67
RBM3-208	ENST00000489344	TRAV18	A0A075B6X5	111 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	TRBV6-6	A0A0A6YYG2	114 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	SMIM31	A0A1B0GVY4	71 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	DPPA5	A6NC42	116 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344		M0QZK8	103 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	GSTP1	P09211	210 aa	Known RBP	10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	SSTR5	P35346	364 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	ARHGDIB	P52566	201 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	MRPS15	P82914	257 aa	Known RBP	10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	ARFRP1	Q13795	201 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	ZNF880	Q6PDB4	577 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	BAIAP2L2	Q6UXY1	529 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	ZNF554	Q86TJ5	538 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	SETD6	Q8TBK2	473 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	CHPT1	Q8WUD6	406 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	KIRREL1	Q96J84	757 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	ZMAT4	Q9H898	229 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	TAF9B	Q9HBM6	251 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	RAB9B	Q9NP90	201 aa		10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	CCDC59	Q9P031	241 aa	Known RBP	10.86	□□□□□ -0.67
RBM3-208	ENST00000489344	C12orf77	C9JDV5	145 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	SPINT2	O43291	252 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	XRCC3	O43542	346 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	HPGDS	O60760	199 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	HBZ	P02008	142 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	APOA1	P02647	267 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	EIF4E	P06730	217 aa	Known RBP	10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	NFYB	P25208	207 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	LTC4S	Q16873	150 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	PNLIPRP3	Q17RR3	467 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	ABHD12	Q8N2K0	398 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	UBALD1	Q8TB05	177 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	DGCR14	Q96DF8	476 aa	Known RBP	10.85	□□□□□ -0.67
RBM3-208	ENST00000489344		Q9N2K0	584 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	C12orf4	Q9NQ89	552 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	ELF5	Q9UKW6	265 aa	Predicted RBP	10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	MGAT4A	Q9UM21	535 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344	MOB4	Q9Y3A3	225 aa		10.85	□□□□□ -0.67
RBM3-208	ENST00000489344		A0A087X0M5	115 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344		A0A1B0GX30	115 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	TMEM235	A6NFC5	223 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	ELK1	P19419	428 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	CD34	P28906	385 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	TALDO1	P37837	337 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	SLC35B1	P78383	322 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	PITPNA	Q00169	270 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	HMGN3	Q15651	99 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	HACD4	Q5VWC8	232 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	MOB1B	Q7L9L4	216 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	C5orf24	Q7Z6I8	188 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	IZUMO1	Q8IYV9	350 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	PRR18	Q8N4B5	295 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	OR52M1	Q8NGK5	317 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	OR1L1	Q8NH94	360 aa		10.84	□□□□□ -0.67
RBM3-208	ENST00000489344	ALMS1	Q8TCU4	4167 aa		10.83	□□□□□ -0.68
RBM3-208	ENST00000489344	FAM172BP	A6NC97	362 aa		10.83	□□□□□ -0.68
RBM3-208	ENST00000489344	LEUTX	A8MZ59	168 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms