RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MRPL48Q96GC5 212 aaKnown RBP12.21□□□□□ -0.45
USP48-210ENST00000489108 GABARAPL3Q9BY60 117 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 MBNL3Q9NUK0 354 aaKnown RBP12.21□□□□□ -0.45
USP48-210ENST00000489108 SLC2A8Q9NY64 477 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.45
USP48-210ENST00000489108 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 POMPQ9Y244 141 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 H7C2Y5 167 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 DEDDO75618 318 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 ALDH3A2P51648 485 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 GYS2P54840 703 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 HTD2P86397 168 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 DEFA5Q01523 94 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 PSG5Q15238 335 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 CD300EQ496F6 205 aaPredicted RBP12.2□□□□□ -0.46
USP48-210ENST00000489108 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 LY6G6FQ5SQ64 297 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 AMIGO2Q86SJ2 522 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 OR2K2Q8NGT1 345 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 TRUB1Q8WWH5 349 aaKnown RBP12.2□□□□□ -0.46
USP48-210ENST00000489108 ORAI1Q96D31 301 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 LGALS12Q96DT0 336 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 IFI27L2Q9H2X8 130 aa12.2□□□□□ -0.46
USP48-210ENST00000489108 NUPR2A6NF83 97 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 H0YJW9 148 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 H3BUA1 57 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 ST8SIA5O15466 376 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 CA11O75493 328 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 SC5DO75845 299 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 BDKRB2P30411 391 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 MC5RP33032 325 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
USP48-210ENST00000489108 FXYD3Q14802 87 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 ZNF343Q6P1L6 599 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
USP48-210ENST00000489108 OR2AK2Q8NG84 335 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 PARP12Q9H0J9 701 aaKnown RBP12.19□□□□□ -0.46
USP48-210ENST00000489108 IMPAD1Q9NX62 359 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 AASSQ9UDR5 926 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 GMPPBQ9Y5P6 360 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
USP48-210ENST00000489108 OR5H14A6NHG9 310 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 CD2P06729 351 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 GBX2P52951 348 aaPredicted RBP12.18□□□□□ -0.46
USP48-210ENST00000489108 PPP3R1P63098 170 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP48-210ENST00000489108 GPR176Q14439 515 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 SLC25A30Q5SVS4 291 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 DMKNQ6E0U4 476 aaPredicted RBP12.18□□□□□ -0.46
USP48-210ENST00000489108 FAM71F2Q6NXP2 309 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 ZNF554Q86TJ5 538 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 LAX1Q8IWV1 398 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 MRPL30Q8TCC3 161 aaKnown RBP12.18□□□□□ -0.46
USP48-210ENST00000489108 GPR148Q8TDV2 347 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 GALMQ96C23 342 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 ZNF184Q99676 751 aaPredicted RBP12.18□□□□□ -0.46
USP48-210ENST00000489108 RNF5Q99942 180 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 BANF2Q9H503 90 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
USP48-210ENST00000489108 RAB29O14966 203 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 SLC22A1O15245 554 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 RBBP9O75884 186 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 OR2A4O95047 310 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 FUT3P21217 361 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 FASP25445 335 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
USP48-210ENST00000489108 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
USP48-210ENST00000489108 MEDAGQ5VYS4 303 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 BVESQ8NE79 360 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 GHSRQ92847 366 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 MYCBPQ99417 103 aaPredicted RBP12.17□□□□□ -0.46
USP48-210ENST00000489108 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 PEMTQ9UBM1 199 aa12.17□□□□□ -0.46
USP48-210ENST00000489108 BAG2O95816 211 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 AADACP22760 399 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 GLIPR1L1Q6UWM5 242 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 MUL1Q969V5 352 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
USP48-210ENST00000489108 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
USP48-210ENST00000489108 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 GYG2O15488 501 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 AIREO43918 545 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 GPX5O75715 221 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 GLAP06280 429 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 XAF1Q6GPH4 301 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms