RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PSCAO43653 123 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 DCTN3O75935 186 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 IGKV1D-12P01611 117 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 OPN1SWP03999 348 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 IL3P08700 152 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 CTLA4P16410 223 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ZNF708P17019 499 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 CDK2P24941 298 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 PPP1CCP36873 323 aaKnown RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 HSPA9P38646 679 aaKnown RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 CEBPGP53567 150 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 CXCR4P61073 352 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 SLC35A2P78381 396 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 FABP5Q01469 135 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 TMEM267Q0VDI3 215 aaPredicted RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 DHRS2Q13268 280 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ITGB3BPQ13352 177 aaPredicted RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 PPP1R1AQ13522 171 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 OR8G1Q15617 311 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ZNF141Q15928 474 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 RGS21Q2M5E4 152 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 MESTQ5EB52 335 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 LCN8Q6JVE9 175 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ADM2Q7Z4H4 148 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 DCXRQ7Z4W1 244 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ATP5L2Q7Z4Y8 100 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 C10orf67Q8IYJ2 551 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 EIF4E3Q8N5X7 224 aaKnown RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 MFSD8Q8NHS3 518 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 CMTM2Q8TAZ6 248 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 Q8WTZ3 238 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 RAB8BQ92930 207 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 PTH2Q96A98 100 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 TMA16Q96EY4 203 aaKnown RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 SLC25A44Q96H78 314 aaPredicted RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 HIGD2AQ9BW72 106 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 GNB1LQ9BYB4 327 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 LINC00588Q9Y4M8 146 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ALG5Q9Y673 324 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 R4GN34 69 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 SCN4AP35499 1836 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 DNMT1P26358 1616 aaKnown RBP1.51□□□□□ -2.17
RFC4-213ENST00000489028 A0A1W2PNN7 141 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 A8MWP6 167 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 C21orf140B9A014 251 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 GOLGA6L19H0YKK7 550 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 LECT2O14960 151 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 SLC25A20O43772 301 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 DEDDO75618 318 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 CPSF4O95639 269 aaKnown RBP1.5□□□□□ -2.17
RFC4-213ENST00000489028 IFNA5P01569 189 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 IGLV3-27P01718 113 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 IGLV6-57P01721 117 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 CALB1P05937 261 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 HRES1P13985 223 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 LGALS3P17931 250 aaKnown RBP1.5□□□□□ -2.17
RFC4-213ENST00000489028 CXCL3P19876 107 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 RPL12P30050 165 aaKnown RBP1.5□□□□□ -2.17
RFC4-213ENST00000489028 OPRM1P35372 400 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 MYL6P60660 151 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 BSPH1Q075Z2 132 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 BAMBIQ13145 260 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 GNA13Q14344 377 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 IHHQ14623 411 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 PDGFRLQ15198 375 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 BATFQ16520 125 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 IMPG1Q17R60 797 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 DEFB134Q4QY38 66 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 CLVS2Q5SYC1 327 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 CD200R1LQ6Q8B3 271 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 RASSF6Q6ZTQ3 369 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 NAA40Q86UY6 237 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 CCDC112Q8NEF3 446 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 OR8J2Q8NGG1 315 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 JOSD2Q8TAC2 188 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 HAVCR2Q8TDQ0 301 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 MS4A6EQ96DS6 147 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 SLC35G5Q96KT7 338 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 TM2D3Q9BRN9 247 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 C1QTNF6Q9BXI9 259 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 UCK1Q9HA47 277 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 HRASLSQ9HDD0 168 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 C3orf18Q9UK00 162 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 DKKL1Q9UK85 242 aa1.5□□□□□ -2.17
RFC4-213ENST00000489028 IGKV1D-37A0A075B6S9 117 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 A0A1B0GU33 70 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 KCNK1O00180 336 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 MRASO14807 208 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 MT-CO2P00403 227 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 HLA-DRAP01903 254 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 CD7P09564 240 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 CXCL2P19875 107 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 RPS12P25398 132 aaKnown RBP1.49□□□□□ -2.17
RFC4-213ENST00000489028 CA7P43166 264 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 NKX2-5P52952 324 aaPredicted RBP1.49□□□□□ -2.17
RFC4-213ENST00000489028 TAS2R45P59539 299 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 SNAP25P60880 206 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 RPS24P62847 133 aaKnown RBP1.49□□□□□ -2.17
RFC4-213ENST00000489028 HERVK_113P63121 156 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 BTN3A2P78410 334 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms