RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 PSMF1Q92530 271 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 TMEM45BQ96B21 275 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 ZNF845Q96IR2 970 aaPredicted RBP16.57■□□□□ 0.24
HMG20B-213ENST00000488973 MAP1LC3BQ9GZQ8 125 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 WDR61Q9GZS3 305 aaKnown RBP16.57■□□□□ 0.24
HMG20B-213ENST00000488973 RBKSQ9H477 322 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 LPAR2Q9HBW0 351 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 IGKV1-39P01597 117 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 IGKV1D-39P04432 117 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 PFN1P07737 140 aaKnown RBP16.57■□□□□ 0.24
HMG20B-213ENST00000488973 IAPPP10997 89 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 OR5A2Q8NGI9 324 aa16.57■□□□□ 0.24
HMG20B-213ENST00000488973 ZNF737O75373 536 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 CD82P27701 267 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 COA6Q5JTJ3 125 aaKnown RBP16.56■□□□□ 0.24
HMG20B-213ENST00000488973 TGIF2LYQ8IUE0 185 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 OR10V1Q8NGI7 309 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 WFIKKN1Q96NZ8 548 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 SMIM7Q9BQ49 75 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 ZNF705GA8MUZ8 300 aaPredicted RBP16.56■□□□□ 0.24
HMG20B-213ENST00000488973 NPIPB11E5RHQ5 1161 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 DEGS1O15121 323 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 TMEM241Q24JQ0 296 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 OR2Y1Q8NGV0 311 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 ABHD3Q8WU67 409 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 DIRC2Q96SL1 478 aa16.56■□□□□ 0.24
HMG20B-213ENST00000488973 SYNGR1O43759 233 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 CCNOP22674 350 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 ADIRFQ15847 76 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 LYSMD4Q5XG99 296 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 C16orf82Q7Z2V1 217 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 CENPVQ7Z7K6 275 aaPredicted RBP16.55■□□□□ 0.24
HMG20B-213ENST00000488973 C17orf78Q8N4C9 275 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 OR1P1Q8NH06 330 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 SAP25Q8TEE9 199 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 APOBEC3DQ96AK3 386 aaPredicted RBP16.55■□□□□ 0.24
HMG20B-213ENST00000488973 STRADBQ9C0K7 418 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 RYDENQ9NUL5 291 aaKnown RBP16.55■□□□□ 0.24
HMG20B-213ENST00000488973 PRSS50Q9UI38 385 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 IGKV1-5P01602 117 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 RFPL3SP0C7P2 107 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 MEF2BQ02080 365 aaPredicted RBP16.55■□□□□ 0.24
HMG20B-213ENST00000488973 HIST1H2AAQ96QV6 131 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 OR4C12Q96R67 309 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 TIMM9Q9Y5J7 89 aa16.55■□□□□ 0.24
HMG20B-213ENST00000488973 TRAV24A0A0B4J272 114 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.54■□□□□ 0.24
HMG20B-213ENST00000488973 K7EP13 123 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 HS3ST1O14792 307 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 KBTBD11O94819 623 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 IGLV2-14P01704 120 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 AMBPP02760 352 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 MDKP21741 143 aaPredicted RBP16.54■□□□□ 0.24
HMG20B-213ENST00000488973 COL10A1Q03692 680 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 WIPI1Q5MNZ9 446 aaPredicted RBP16.54■□□□□ 0.24
HMG20B-213ENST00000488973 LEMD1Q68G75 181 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 SLC23A3Q6PIS1 610 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 TAF15Q92804 592 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMG20B-213ENST00000488973 LHX4Q969G2 390 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 SLC39A9Q9NUM3 307 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 C5orf49A4QMS7 147 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 LRRC3CA6NJW4 275 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 IGHV3-9P01782 118 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 ARF1P84077 181 aaKnown RBP16.54■□□□□ 0.24
HMG20B-213ENST00000488973 BSXQ3C1V8 233 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 C1orf194Q5T5A4 169 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 LINC00470Q9BZP3 86 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 ZFP30Q9Y2G7 519 aa16.54■□□□□ 0.24
HMG20B-213ENST00000488973 FREM1Q5H8C1 2179 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 CFAP54Q96N23 3096 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 SS18L1O75177 396 aaPredicted RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 MRPL33O75394 65 aaKnown RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 TRAPPC6AO75865 159 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 CD55P08174 381 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 ESPL1Q14674 2120 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 OR51G1Q8NGK1 321 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 RDH5Q92781 318 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 SEPSECSQ9HD40 501 aaKnown RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 KIR2DL5BA0A0G2JN68 375 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 KIR2DL5BA0A0G2JPC4 375 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 TMEM250H0YL14 139 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 TDGF1P13385 188 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 ELLP55199 621 aaPredicted RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 PMS2CLQ68D20 193 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 KIR2DL5AQ8N109 375 aa16.53■□□□□ 0.24
HMG20B-213ENST00000488973 THOC3Q96J01 351 aaKnown RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 ZNF552Q9H707 407 aaPredicted RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 LIN7CQ9NUP9 197 aaKnown RBP16.53■□□□□ 0.24
HMG20B-213ENST00000488973 FAM90A26D6RGX4 464 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 NDUFS8O00217 210 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 CCL2P13500 99 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 BRS3P32247 399 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 RPL23P62829 140 aaKnown RBP16.52■□□□□ 0.24
HMG20B-213ENST00000488973 ZNF585BQ52M93 769 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 RPP25LQ8N5L8 163 aaKnown RBP16.52■□□□□ 0.24
HMG20B-213ENST00000488973 OR5P3Q8WZ94 311 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 ACY3Q96HD9 319 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 DNAJC4Q9NNZ3 241 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 TMEM9BQ9NQ34 198 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms