RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RCHY1Q96PM5 261 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 IL19Q9UHD0 177 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 OR2T8A6NH00 312 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 MT-ATP6P00846 226 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 DRD1P21728 446 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 GFERP55789 205 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 ZP4Q12836 540 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 GCSAMLQ5JQS6 135 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 BET1LQ9NYM9 111 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 PSENENQ9NZ42 101 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 RALGAPA1Q6GYQ0 2036 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 FUT7Q11130 342 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 ACSM6Q6P461 480 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 H1FNTQ75WM6 255 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-229ENST00000488765 DOK3Q7L591 496 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 ZNF295-AS1Q8N0V1 137 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 MEGF9Q9H1U4 602 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
MCF2L-229ENST00000488765 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
MCF2L-229ENST00000488765 C11orf94C9JXX5 98 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 CLPSP04118 112 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 IGHV4-34P06331 123 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 BAXQ07812 192 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 P2RX4Q99571 388 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 CACNG5Q9UF02 275 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 IGKV1-27A0A075B6S5 117 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 VSTM2BA6NLU5 285 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 VAMP5O95183 116 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 CD38P28907 300 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 TSPOP30536 169 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 KRTCAP3Q53RY4 240 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 C9orf40Q8IXQ3 194 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 C1orf174Q8IYL3 243 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 GPR146Q96CH1 333 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 SPIN2AQ99865 258 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 SPIN2BQ9BPZ2 258 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 DECR2Q9NUI1 292 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 SPTBN2O15020 2390 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 TRAV1-1A0A0B4J248 108 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 GLB1P16278 677 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 TCL1AP56279 114 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 LINC01551Q86U37 167 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 UHRF2Q96PU4 802 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 GSX1Q9H4S2 264 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-229ENST00000488765 CLN8Q9UBY8 286 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 PCDH15Q96QU1 1955 aa13.81□□□□□ -0.2
MCF2L-229ENST00000488765 PATE4P0C8F1 98 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 ANAPC16Q96DE5 110 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 ZNF586Q9NXT0 402 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 ELOVL5Q9NYP7 299 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 IGHV2-70DA0A0C4DH43 119 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 SNURFLB1AK76 121 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 PSG2P11465 335 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 KITLGP21583 273 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 SNAI3Q3KNW1 292 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 Q56UQ5 140 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 MRGPRDQ8TDS7 321 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 IL1F10Q8WWZ1 152 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-229ENST00000488765 GNB4Q9HAV0 340 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 DCHS1Q96JQ0 3298 aa13.8□□□□□ -0.2
MCF2L-229ENST00000488765 EP300Q09472 2414 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-229ENST00000488765 NPIPB7O75200 414 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 TNFSF4P23510 183 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 DAP3P51398 398 aaKnown RBP13.79□□□□□ -0.2
MCF2L-229ENST00000488765 ZNF525Q8N782 197 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 TNFSF14O43557 240 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 VDAC1P21796 283 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 SRP14P37108 136 aaKnown RBP13.79□□□□□ -0.2
MCF2L-229ENST00000488765 CDC34P49427 236 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-229ENST00000488765 HLA-DRB5Q30154 266 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 OR10G9Q8NGN4 311 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 OR10G7Q8NGN6 311 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 AGMATQ9BSE5 352 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 IGKV1-12A0A0C4DH73 117 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 IGKV1D-12P01611 117 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 CD46P15529 392 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 SMRP1Q8NCR6 262 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
MCF2L-229ENST00000488765 A0A1W2PRS3 328 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 SERPINE2P07093 398 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 NPBWR2P48146 333 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 UBE2NP61088 152 aaKnown RBP13.78□□□□□ -0.2
MCF2L-229ENST00000488765 MPV17L2Q567V2 206 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 Q8N976 141 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 NAA38Q9BRA0 125 aaKnown RBP13.78□□□□□ -0.2
MCF2L-229ENST00000488765 TRAV38-1A0A0B4J264 116 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms