RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 FOSL1P15407 271 aa12.48□□□□□ -0.41
EPHA1-205ENST00000488068 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
EPHA1-205ENST00000488068 NKX6-1P78426 367 aaPredicted RBP12.48□□□□□ -0.41
EPHA1-205ENST00000488068 PAX5Q02548 391 aa12.48□□□□□ -0.41
EPHA1-205ENST00000488068 FAM90A1Q86YD7 464 aa12.48□□□□□ -0.41
EPHA1-205ENST00000488068 SVILO95425 2214 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 OOEPA6NGQ2 149 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 A8MXE2 369 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 OR2C1O95371 312 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 CFHR2P36980 270 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 C11orf1Q9H5F2 150 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
EPHA1-205ENST00000488068 PRRG2O14669 202 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 HSPA12AO43301 675 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 SLC25A6P12236 298 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 CEBPDP49716 269 aaPredicted RBP12.47□□□□□ -0.41
EPHA1-205ENST00000488068 DEFA6Q01524 100 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
EPHA1-205ENST00000488068 CEP250Q9BV73 2442 aa12.46□□□□□ -0.41
EPHA1-205ENST00000488068 MMP9P14780 707 aa12.46□□□□□ -0.41
EPHA1-205ENST00000488068 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
EPHA1-205ENST00000488068 SH3BGRL3Q9H299 93 aa12.46□□□□□ -0.41
EPHA1-205ENST00000488068 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
EPHA1-205ENST00000488068 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 ADAM20O43506 726 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 IGLV2-14P01704 120 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.42
EPHA1-205ENST00000488068 KLF3P57682 345 aaPredicted RBP12.46□□□□□ -0.42
EPHA1-205ENST00000488068 SSTP61278 116 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 CLINT1Q14677 625 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 MRGPRGQ86SM5 289 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 ZNF383Q8NA42 475 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 OR2Z1Q8NG97 314 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 ZDHHC8Q9ULC8 765 aa12.46□□□□□ -0.42
EPHA1-205ENST00000488068 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 TNFSF12O43508 249 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 LY86O95711 162 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 TBR1Q16650 682 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 GALMQ96C23 342 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 SCNM1Q9BWG6 230 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 FRYQ5TBA9 3013 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 BORCS7-ASMTA0A0B4J1R7 106 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 K7ENP7 123 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 PRH1P02810 166 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 PPP1CCP36873 323 aaKnown RBP12.45□□□□□ -0.42
EPHA1-205ENST00000488068 CEACAM6P40199 344 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 OR3A1P47881 315 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 DOLPP1Q86YN1 238 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 PRR18Q8N4B5 295 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
EPHA1-205ENST00000488068 PUS1Q9Y606 427 aaKnown RBP eCLIP12.45□□□□□ -0.42
EPHA1-205ENST00000488068 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 S100A2P29034 98 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 ID3Q02535 119 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 MSMO1Q15800 293 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 Q8NA96 180 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 COQ2Q96H96 371 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 LURAP1Q96LR2 239 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 GPHA2Q96T91 129 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 LIN7CQ9NUP9 197 aaKnown RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 GAR1Q9NY12 217 aaKnown RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 DOK5Q9P104 306 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 STRAPQ9Y3F4 350 aaKnown RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 MMP24Q9Y5R2 645 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 RNF212BA8MTL3 300 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 SERPINE2P07093 398 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 COL10A1Q03692 680 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 LRP11Q86VZ4 500 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 RBM7Q9Y580 266 aaKnown RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 A0A1B0GU03 582 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 A0A1B0GV50 99 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 GPR37O15354 613 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 NDUFA6P56556 154 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 SOHLH1Q5JUK2 328 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 TMEM171Q8WVE6 324 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 LSM10Q969L4 123 aaKnown RBP12.44□□□□□ -0.42
EPHA1-205ENST00000488068 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
EPHA1-205ENST00000488068 A0A1B0GW64 132 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 AESQ08117 197 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 PSG2P11465 335 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 BMP5P22003 454 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 FAM27E3Q08E93 113 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 SSX8Q7RTT4 187 aa12.43□□□□□ -0.42
EPHA1-205ENST00000488068 CISD2Q8N5K1 135 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms