RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 A6NHS1 94 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 FCN1O00602 326 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 NAPSAO96009 420 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 CDK1P06493 297 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 OR8U8P0C7N1 319 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 EGR2P11161 476 aaPredicted RBP9.46□□□□□ -0.9
VPS16-208ENST00000487461 SRMP19623 302 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 NDPQ00604 133 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 ZNF616Q08AN1 781 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 C19orf54Q5BKX5 351 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 OGFRL1Q5TC84 451 aaPredicted RBP9.46□□□□□ -0.9
VPS16-208ENST00000487461 RNLSQ5VYX0 342 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 GLT8D1Q68CQ7 371 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 CEACAM19Q7Z692 300 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 SVOPQ8N4V2 548 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 KCNG3Q8TAE7 436 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 PHYHIPQ92561 330 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 DCUN1D4Q92564 292 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 TMEM59Q9BXS4 323 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 PARP12Q9H0J9 701 aaKnown RBP9.46□□□□□ -0.9
VPS16-208ENST00000487461 ALX4Q9H161 411 aaPredicted RBP9.46□□□□□ -0.9
VPS16-208ENST00000487461 FBXL15Q9H469 300 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 KIAA1456Q9P272 454 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 STEAP1Q9UHE8 339 aa9.46□□□□□ -0.9
VPS16-208ENST00000487461 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
VPS16-208ENST00000487461 TMEM14DPA8MWL7 114 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 PTGES3LE9PB15 166 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 RRHO14718 337 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 RAB29O14966 203 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 SLC22A1O15245 554 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 SOX15O60248 233 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 SNRPBP14678 240 aaKnown RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 INSL3P51460 131 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 CX3CL1P78423 397 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 ZNF660Q6AZW8 331 aaPredicted RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 FAM131AQ6UXB0 335 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 GLDNQ6ZMI3 551 aaPredicted RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 SETD6Q8TBK2 473 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 CASTOR1Q8WTX7 329 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 VCX3BQ9H321 246 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 CHMP1AQ9HD42 196 aaPredicted RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 PIPOXQ9P0Z9 390 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 SLC23A1Q9UHI7 598 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
VPS16-208ENST00000487461 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 SORL1Q92673 2214 aa9.45□□□□□ -0.9
VPS16-208ENST00000487461 TRBV6-6A0A0A6YYG2 114 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 H0YJW9 148 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 OVOL1O14753 267 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 CASQ2O14958 399 aaPredicted RBP9.44□□□□□ -0.9
VPS16-208ENST00000487461 SOCS1O15524 211 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
VPS16-208ENST00000487461 SPHARQ15513 63 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 ECSCRQ19T08 205 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 HSD17B12Q53GQ0 312 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 NRG4Q8WWG1 115 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
VPS16-208ENST00000487461 GFI1Q99684 422 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 AGMATQ9BSE5 352 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
VPS16-208ENST00000487461 MND1Q9BWT6 205 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 LPAR5Q9H1C0 372 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 TPSG1Q9NRR2 321 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 AK3Q9UIJ7 227 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 GAB2Q9UQC2 676 aa9.44□□□□□ -0.9
VPS16-208ENST00000487461 A0A1W2PN81 502 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 OR5H14A6NHG9 310 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 ITGB1BP1O14713 200 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 PROP1O75360 226 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 LY86O95711 162 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 BPNT1O95861 308 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
VPS16-208ENST00000487461 SCTP09683 121 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 UCHL1P09936 223 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 MC5RP33032 325 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 CHRNA7P36544 502 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 CEACAM6P40199 344 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 SLURP1P55000 103 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 TMEM50BP56557 158 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 LINC00205P59089 165 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 ZNF429Q86V71 674 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 FAM89BQ8N5H3 189 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 OR5AN1Q8NGI8 311 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 TMEM203Q969S6 136 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 TOLLIPQ9H0E2 274 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 C11orf54Q9H0W9 315 aaPredicted RBP9.43□□□□□ -0.9
VPS16-208ENST00000487461 RIMS4Q9H426 269 aaPredicted RBP9.43□□□□□ -0.9
VPS16-208ENST00000487461 OR1A1Q9P1Q5 309 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 RNF150Q9ULK6 438 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 FOXA2Q9Y261 457 aaPredicted RBP9.43□□□□□ -0.9
VPS16-208ENST00000487461 SMAD5-AS1Q9Y6J3 95 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 A3GALT2U3KPV4 340 aa9.43□□□□□ -0.9
VPS16-208ENST00000487461 FOXI3A8MTJ6 420 aaPredicted RBP9.42□□□□□ -0.9
VPS16-208ENST00000487461 LINC01619G3V211 115 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms