RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 CD74P04233 296 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 RPL31P62899 125 aaKnown RBP12.71□□□□□ -0.37
EPHB4-206ENST00000487222 CXorf66Q5JRM2 361 aaPredicted RBP12.71□□□□□ -0.37
EPHB4-206ENST00000487222 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 TLNRD1Q9H1K6 362 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 IGHV3OR15-7A0A075B7D8 119 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 MT-ND6P03923 174 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 CD99P14209 185 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 PAXXQ9BUH6 204 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 C5orf66Q9H5L9 145 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
EPHB4-206ENST00000487222 IGHV1-45A0A0A0MS14 117 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 CIDEAO60543 219 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 RPLP1P05386 114 aaKnown RBP12.71□□□□□ -0.38
EPHB4-206ENST00000487222 HIST1H1BP16401 226 aaKnown RBP12.71□□□□□ -0.38
EPHB4-206ENST00000487222 UCP2P55851 309 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 TBX15Q96SF7 602 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 P2RX4Q99571 388 aa12.71□□□□□ -0.38
EPHB4-206ENST00000487222 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 WNT5AP41221 380 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 FAM222BQ8WU58 562 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 ZNF552Q9H707 407 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 CCDC88CQ9P219 2028 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 K7N7A8 449 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 F2RL2O00254 374 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 PGLYRP1O75594 196 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 OR2H2O95918 312 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 TRGC2P03986 189 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 RPL7P18124 248 aaKnown RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 MFAP2P55001 183 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 TAF15Q92804 592 aaKnown RBP eCLIP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 TMUB1Q9BVT8 246 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 NDUFB4O95168 129 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 SNRNP40Q96DI7 357 aaKnown RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-206ENST00000487222 ZDBF2Q9HCK1 2354 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 GVINP1Q7Z2Y8 2422 aa12.7□□□□□ -0.38
EPHB4-206ENST00000487222 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 CELA2AP08217 269 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 PKIBQ9C010 78 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 PPIAL4EA0A075B759 164 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 A6NDN8 102 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 PPIAL4DF5H284 164 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 PPIAL4FP0DN26 164 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 Q5BKY6 102 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 PPIAL4AQ9Y536 164 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 TMEM14DPA8MWL7 114 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 SIGLEC5O15389 551 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 HYPMO75409 117 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 P2RY6Q15077 328 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 ZNF645Q8N7E2 425 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 LILRB1Q8NHL6 650 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 ZNFX1Q9P2E3 1918 aaKnown RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 NPIPB13A6NJU9 1138 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 NPIPB4C9JG80 1138 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 HERVK_113P61574 105 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
EPHB4-206ENST00000487222 DGAT2L7PQ6IED9 249 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 SLC25A45Q8N413 288 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 GPR146Q96CH1 333 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 RHOVQ96L33 236 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 Q96M66 194 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 TMEM208Q9BTX3 173 aa12.69□□□□□ -0.38
EPHB4-206ENST00000487222 A8MWL6 223 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 CDK2AP1O14519 115 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 FGF5P12034 268 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 MPV17P39210 176 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 MMDQ15546 238 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SCGB1D4Q6XE38 83 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 GCSAMQ8N6F7 178 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 DCAF16Q9NXF7 216 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 KLF4O43474 513 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SELENOTP62341 195 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 BPIFA4PQ86YQ2 179 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 FGFRL1Q8N441 504 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SCN10AQ9Y5Y9 1956 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 KLK2P20151 261 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 CD40P25942 277 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SUCLG1P53597 346 aaKnown RBP12.68□□□□□ -0.38
EPHB4-206ENST00000487222 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
EPHB4-206ENST00000487222 COTL1Q14019 142 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SELENOHQ8IZQ5 122 aaKnown RBP12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SCARF2Q96GP6 870 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms