RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 OR52M1Q8NGK5 317 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 CLDND2Q8NHS1 167 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 C8orf46Q8TAG6 207 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 EDARADDQ8WWZ3 215 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 GALNT14Q96FL9 552 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 SUCNR1Q9BXA5 334 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 CHIAQ9BZP6 476 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 KCNIP3Q9Y2W7 256 aa11.83□□□□□ -0.51
COL9A1-207ENST00000486080 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL9A1-207ENST00000486080 DLX1P56177 255 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 H2BFSP57053 126 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 PRB3Q04118 309 aaPredicted RBP11.83□□□□□ -0.52
COL9A1-207ENST00000486080 ESCO2Q56NI9 601 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 LY6G6FQ5SQ64 297 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 BTNL3Q6UXE8 466 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 OR10A7Q8NGE5 316 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 OR51H1Q8NH63 302 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 GSX2Q9BZM3 304 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 ZNF436Q9C0F3 470 aaPredicted RBP11.83□□□□□ -0.52
COL9A1-207ENST00000486080 IFI27L2Q9H2X8 130 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.52
COL9A1-207ENST00000486080 LOC105371242A0A075B767 164 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-207ENST00000486080 GPR12P47775 334 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 TMEM30BQ3MIR4 351 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 C11orf88Q6PI97 169 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 CLEC2AQ6UVW9 174 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-207ENST00000486080 COQ8AQ8NI60 647 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 SDHAF2Q9NX18 166 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
COL9A1-207ENST00000486080 A0A0B4J2A0 478 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 VWC2LB2RUY7 222 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 PROP1O75360 226 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ADAP1O75689 374 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ANXA3P12429 323 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 F2RP25116 425 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 LINC00205P59089 165 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-207ENST00000486080 Q3ZCU0 254 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 MSI2Q96DH6 328 aaKnown RBP11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ONECUT1Q9UBC0 465 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 SHPKQ9UHJ6 478 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 IGHV4-61A0A0C4DH41 118 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ITGB1BP1O14713 200 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 LIPFP07098 398 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 ZNF16P17020 682 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-207ENST00000486080 S100GP29377 79 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
COL9A1-207ENST00000486080 LCN2P80188 198 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 RPL39P5Q59GN2 51 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 PPP1R14BQ96C90 147 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
COL9A1-207ENST00000486080 CSMD1Q96PZ7 3565 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 MPTX1A8MV57 137 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 FAM25EA8MYX2 175 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 NDUFS8O00217 210 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 OR2A4O95047 310 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 HOXB5P09067 269 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 RAB7AP51149 207 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
COL9A1-207ENST00000486080 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
COL9A1-207ENST00000486080 SAA2-SAA4A0A096LPE2 208 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 H0Y980 276 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 SAA2P0DJI9 122 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-207ENST00000486080 HLA-GP17693 338 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 ARF6P62330 175 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 MSMO1Q15800 293 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 Q5BKY6 102 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 LYZL2Q7Z4W2 148 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 LYG1Q8N1E2 194 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 Q8N7P7 452 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 DRAXINQ8NBI3 349 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-207ENST00000486080 SEC22AQ96IW7 307 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 SESN1Q9Y6P5 492 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 NAV2Q8IVL1 2488 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 C13orf42A0A1B0GVH6 325 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 LINC00473A8K010 186 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 UCP1P25874 307 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms